Sequence details bmy_19185 (Coding sequence)

Part of scaffold_1999 (Scaffold)

For more information consult the page for scaffold_1999 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

POLR1D ENSBTAG00000008642 (Cow)

Gene Details

DNA-directed RNA polymerases I and III subunit RPAC2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000044471, Cow)

Protein Percentage 89.47%
cDNA percentage 90.73%
Ka/Ks Ratio 0.19788 (Ka = 0.0517, Ks = 0.2615)

POLR1D  (Minke Whale)

Gene Details

polymerase (RNA) I polypeptide D, 16kDa

External Links

Gene match (Identifier: BACU012130, Minke Whale)

Protein Percentage 88.39%
cDNA percentage 92.86%
Ka/Ks Ratio 0.64843 (Ka = 0.0671, Ks = 0.1035)

Additional orthologs identified in other species via the OPTIC pipeline.

POLR1D (Human)   Polr1d (Mouse)  

Genome Location

Sequence Coding sequence

Length: 441 bp    Location:242531..242971   Strand:+
Raw sequence 
>bmy_19185
ATGGAAGAGGACCAGGAGCTGGAGAGAAAAATATCTGGATTGAAGACCCCAATGGCTGAAGATGAGAGGAAGACAGCCCTGGAAATGGTCCAGGCACCTGGGACAGATAGACACTGTGTGACATTTGTATTGCACGAGGAGGACCATACCCTGGGAAATTCTCTTCGTTACCTGATCATGAAGAACCCGGAAGTGGAATTTTGTGGTTACACTACAACCCATCCTTCAGAGAGCAAAATTAGTTTGCACATACAGACTCGAGGTGCCCTTCCAGCTGCTGAGCCCTTTCGGAGAGGCCTGACTGAGCTCATGACAGACATCTGCCAACATGTGCTTGACACGTTTGAAGCCAGCATAAAGGAATATAAGGATCAAAAAGCCAGCAGAAATGAAGCCACATTCAAGTGCCTTATGCACTATACAGGGAGGACTGACTTCTAA

Related Sequences

bmy_19185T0 Protein

Length: 147 aa      
>bmy_19185T0
MEEDQELERKISGLKTPMAEDERKTALEMVQAPGTDRHCVTFVLHEEDHTLGNSLRYLIMKNPEVEFCGYTTTHPSESKISLHIQTRGALPAAEPFRRGLTELMTDICQHVLDTFEASIKEYKDQKASRNEATFKCLMHYTGRTDF*