Part of scaffold_1971 (Scaffold)

For more information consult the page for scaffold_1971 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SYDE1 ENSTTRG00000015415 (Bottlenosed dolphin)

Gene Details

synapse defective 1, Rho GTPase, homolog 1 (C. elegans)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014609, Bottlenosed dolphin)

Protein Percentage 98.59%
cDNA percentage 98.63%
Ka/Ks Ratio 0.17109 (Ka = 0.0063, Ks = 0.0371)

SYDE1 ENSBTAG00000015184 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020203, Cow)

Protein Percentage 95.54%
cDNA percentage 93.21%
Ka/Ks Ratio 0.08232 (Ka = 0.0206, Ks = 0.2507)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2466 bp    Location:11156..16976   Strand:+
>bmy_19190
ATGGCCGAGCCGCTACTCAGGAAAACCTTCTCCCGCCTTCGGGGCCGGGAGAAACTTCCCCGGAAAAAGTCGGACGCGAAGGAGCGCGGCCGCCCAGCCCAGCGCCCGGAGCCCAGTCCTCCAGAACCAGAGCCCCAGGCCCCGGAAGGATCCCAGGCTGGAGCAGAGGGGCCCCCCAGCCCCGAGGCATCTCGGAGCCCGGCTCGGGGTGCCTACCTGCAGAGCCTGGAGCCCAGCAGCCGCCGATGGGTGCTGGGCGGGGCCAAGCCACCAGATGAGGCCACCTTGGGGCCCGGGGCAGCTGGCAGTAGGGAGCCTGCTGGTGAGATCTGGTACAACCCCATCCCTGAGGAGGACCCCAGACTCTCGGCACCTGAGCTCCCAGGCCCACAGCCAGGCTCAGCTGAGCCGGAGAGCCTGGCCTCCCCAGGCGCAGCCCCCGCCAGTCCCCCAAACAAAGCCTCCCGCACCAAGTCCCCAGGCCCGGCCAGGCGCCTCTCAATGAAGATGAAGAAGCTGCCCGAGCTGCGGCGCCGCCTGAGTCTGCGGAGCACCCGGGCTGGCCGAGAGCGTGAGCGAGCCGCCCCCGCGGGGTCCGTCATCAGCCGTTACCACCTGGACAGCAGCGTGGGGACCCCGGGGCGGGCGGCAGTGTCTGAGGGCGCACGGGGCCTGAGGGCCGGTTACCTCAGTGATGGCGACTCTCCTGAGCGCCCAGCGGGGCCCCCGTCGCCCACCGCCTTCCGCCCCTATGAGGTGGGCCCATCGGCCCGGACGCCCCCCACTGCACTCTGGGGCCGCCTCAGCCTGCACCTGTACGGGCTGGGGGGGCTGCGACCGGCACCTGGGGCCACTCCGCGAGACCTCTGCTGCCTGCTGCAGGTGGATGGGGTGGCCCGGGCCCGAACGGGGCCGCTGCGTGGGGGGCCAGACTTCCTGCGGCTGGACCACACCTTCCACCTGGAACTCGAGGCCGCGCGGCTGCTGCGGGCCCTGGTGCTGGCGTGGGACCCCGGCGTTCGGCGGCACCGGCCCTGCGCCCAGGGTACTGTGCTGCTGCCCACGGTTTTCCGAGGGTGCGAGGCCCAGCAGCTGGCTGTGCGCCTGGAGCCCCAAGGGCTGCTGTATGCCAAGCTGACCCTGTCGGAGCAACAGGAAGCACCAGGCACAGCTGAGCCCCGAGTCTTCGGGCTGCCCCTGCCACTGCTCGTGGAGCGGGAGCAGTCCCCGGGCCAGGTGCCCCTCATCATCCAGAAGTGTGTTGGGCAGATCGAGCGCCGAGGGCTACGGGTAGTGGGGCTGTACCGTCTGTGCGGCTCAGCAGCCGTGAAGAAAGAGCTTCGAGATGCCTTTGAGCGGGACAGTGCAGCTGTCTGCCTCTCCGAGGACCTGTACCCCGATATCAATGTCATCACTGGTCAGCATGCCCCTTCTCTCTCCTGCCTGCTCCTCATTCAACCCTCACCTCAAGGCAGTCCCTGTGGTCCCTCTGGGACCTCACCCCTTCTGTTGGCCTTGTTTTCACCTTCCTGTACCTATCCTCCTCCTGTTCCCCTGCTCCCAGCCCCAGCTGAATCTCCAGCCTCAGAAACCAGCGGTGCCCTGATCAGAGTGGGCCCTGTATCCACAGGCATCCTCAAGGATTATCTTCGGGAGTTGCCTACCCCGCTCATCACCCAGCCCCTCTATCAGGTGGTGTTGGAGGCCATGGCCCGAGAGCCCCCAAGCAGGGCTCCTTCCAGCACTGAGGGCACCCGTGGGCTCCTCAGCTGCCTGCCAGATGTGGAGAGGAACCTGGCCGTTTGCTTCGGTCCTGTGCTGCTGCCGGCGCGCCAAGCACCCGCCAGGCCCCGCATCCGCAGCTCTGGCCCGGGCCTCTCGAATGCAGTGGACTTCAAGCGCCACATCGAGGTGCTGCACTACCTGCTGCAAGCCTGGCCAGGTGAGCTGGCCCTCGCCCCCGCCCCCGCGCCGCCGATCGTAGCCAGGCCGCCGCTACGATGCTTTCTCCAGTGGCCAATTAGAGTCTCGGGCTTCAGGCAAGCCACGCCCCCTAGTCCGAATCCGCGCAGGCCCCCCGAGGCTCCGGAGCTCGTCCCGTACCTGCGGCCCAAACGACAGCCGCCGCTGCACTTGCCGCTAGCGAGCCCCGAAGTGGTGACTCGGCCCCGCGGCCGGGGCGGCCCCGAGAGTCCTCCGAGCAACCGCTACGCCGGTGACTGGAGCGTTTGCGGGCGGGACTTCCTGCCTTGTGGGCGGGACTTCCTGTCCGGGCCGGACTACGACCACGTGACGGGCAGCGACAGCGAAGACGAGGACGAAGAGGCTGGCGAGCCGACGGTGGCCACCGACTTCGAAGACGACTTCGAGGCTCCCTTCAACCCGCACCTGAACCTCAAAGACTTTGATGCCCTCATCATGGACCTGGAGAGAGAGCTCTCCAAGCAGATCAACGTGTGTCTGTGA

Related Sequences

bmy_19190T0 Protein

Length: 822 aa      View alignments
>bmy_19190T0
MAEPLLRKTFSRLRGREKLPRKKSDAKERGRPAQRPEPSPPEPEPQAPEGSQAGAEGPPSPEASRSPARGAYLQSLEPSSRRWVLGGAKPPDEATLGPGAAGSREPAGEIWYNPIPEEDPRLSAPELPGPQPGSAEPESLASPGAAPASPPNKASRTKSPGPARRLSMKMKKLPELRRRLSLRSTRAGRERERAAPAGSVISRYHLDSSVGTPGRAAVSEGARGLRAGYLSDGDSPERPAGPPSPTAFRPYEVGPSARTPPTALWGRLSLHLYGLGGLRPAPGATPRDLCCLLQVDGVARARTGPLRGGPDFLRLDHTFHLELEAARLLRALVLAWDPGVRRHRPCAQGTVLLPTVFRGCEAQQLAVRLEPQGLLYAKLTLSEQQEAPGTAEPRVFGLPLPLLVEREQSPGQVPLIIQKCVGQIERRGLRVVGLYRLCGSAAVKKELRDAFERDSAAVCLSEDLYPDINVITGQHAPSLSCLLLIQPSPQGSPCGPSGTSPLLLALFSPSCTYPPPVPLLPAPAESPASETSGALIRVGPVSTGILKDYLRELPTPLITQPLYQVVLEAMAREPPSRAPSSTEGTRGLLSCLPDVERNLAVCFGPVLLPARQAPARPRIRSSGPGLSNAVDFKRHIEVLHYLLQAWPGELALAPAPAPPIVARPPLRCFLQWPIRVSGFRQATPPSPNPRRPPEAPELVPYLRPKRQPPLHLPLASPEVVTRPRGRGGPESPPSNRYAGDWSVCGRDFLPCGRDFLSGPDYDHVTGSDSEDEDEEAGEPTVATDFEDDFEAPFNPHLNLKDFDALIMDLERELSKQINVCL*