Sequence detailsbmy_19190 (Coding sequence)

Part of scaffold_1971 (SequenceType object (1))

For more information consult the page for scaffold_1971 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SYDE1ENSTTRG00000015415 (Bottlenosed dolphin)

Gene Details

synapse defective 1, Rho GTPase, homolog 1 (C. elegans)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014609, Bottlenosed dolphin)

Protein Percentage 98.59%
cDNA percentage 98.63%
Ka/Ks Ratio 0.17109 (Ka = 0.0063, Ks = 0.0371)

SYDE1ENSBTAG00000015184 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000020203, Cow)

Protein Percentage 95.54%
cDNA percentage 93.21%
Ka/Ks Ratio 0.08232 (Ka = 0.0206, Ks = 0.2507)

Additional orthologs identified in other species via the OPTIC pipeline.

SYDE1 (Human)   Syde1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2466 bp    Location:11156..16976   Strand:+
Raw sequence 
>bmy_19190
ATGGCCGAGCCGCTACTCAGGAAAACCTTCTCCCGCCTTCGGGGCCGGGAGAAACTTCCCCGGAAAAAGTCGGACGCGAAGGAGCGCGGCCGCCCAGCCCAGCGCCCGGAGCCCAGTCCTCCAGAACCAGAGCCCCAGGCCCCGGAAGGATCCCAGGCTGGAGCAGAGGGGCCCCCCAGCCCCGAGGCATCTCGGAGCCCGGCTCGGGGTGCCTACCTGCAGAGCCTGGAGCCCAGCAGCCGCCGATGGGTGCTGGGCGGGGCCAAGCCACCAGATGAGGCCACCTTGGGGCCCGGGGCAGCTGGCAGTAGGGAGCCTGCTGGTGAGATCTGGTACAACCCCATCCCTGAGGAGGACCCCAGACTCTCGGCACCTGAGCTCCCAGGCCCACAGCCAGGCTCAGCTGAGCCGGAGAGCCTGGCCTCCCCAGGCGCAGCCCCCGCCAGTCCCCCAAACAAAGCCTCCCGCACCAAGTCCCCAGGCCCGGCCAGGCGCCTCTCAATGAAGATGAAGAAGCTGCCCGAGCTGCGGCGCCGCCTGAGTCTGCGGAGCACCCGGGCTGGCCGAGAGCGTGAGCGAGCCGCCCCCGCGGGGTCCGTCATCAGCCGTTACCACCTGGACAGCAGCGTGGGGACCCCGGGGCGGGCGGCAGTGTCTGAGGGCGCACGGGGCCTGAGGGCCGGTTACCTCAGTGATGGCGACTCTCCTGAGCGCCCAGCGGGGCCCCCGTCGCCCACCGCCTTCCGCCCCTATGAGGTGGGCCCATCGGCCCGGACGCCCCCCACTGCACTCTGGGGCCGCCTCAGCCTGCACCTGTACGGGCTGGGGGGGCTGCGACCGGCACCTGGGGCCACTCCGCGAGACCTCTGCTGCCTGCTGCAGGTGGATGGGGTGGCCCGGGCCCGAACGGGGCCGCTGCGTGGGGGGCCAGACTTCCTGCGGCTGGACCACACCTTCCACCTGGAACTCGAGGCCGCGCGGCTGCTGCGGGCCCTGGTGCTGGCGTGGGACCCCGGCGTTCGGCGGCACCGGCCCTGCGCCCAGGGTACTGTGCTGCTGCCCACGGTTTTCCGAGGGTGCGAGGCCCAGCAGCTGGCTGTGCGCCTGGAGCCCCAAGGGCTGCTGTATGCCAAGCTGACCCTGTCGGAGCAACAGGAAGCACCAGGCACAGCTGAGCCCCGAGTCTTCGGGCTGCCCCTGCCACTGCTCGTGGAGCGGGAGCAGTCCCCGGGCCAGGTGCCCCTCATCATCCAGAAGTGTGTTGGGCAGATCGAGCGCCGAGGGCTACGGGTAGTGGGGCTGTACCGTCTGTGCGGCTCAGCAGCCGTGAAGAAAGAGCTTCGAGATGCCTTTGAGCGGGACAGTGCAGCTGTCTGCCTCTCCGAGGACCTGTACCCCGATATCAATGTCATCACTGGTCAGCATGCCCCTTCTCTCTCCTGCCTGCTCCTCATTCAACCCTCACCTCAAGGCAGTCCCTGTGGTCCCTCTGGGACCTCACCCCTTCTGTTGGCCTTGTTTTCACCTTCCTGTACCTATCCTCCTCCTGTTCCCCTGCTCCCAGCCCCAGCTGAATCTCCAGCCTCAGAAACCAGCGGTGCCCTGATCAGAGTGGGCCCTGTATCCACAGGCATCCTCAAGGATTATCTTCGGGAGTTGCCTACCCCGCTCATCACCCAGCCCCTCTATCAGGTGGTGTTGGAGGCCATGGCCCGAGAGCCCCCAAGCAGGGCTCCTTCCAGCACTGAGGGCACCCGTGGGCTCCTCAGCTGCCTGCCAGATGTGGAGAGGAACCTGGCCGTTTGCTTCGGTCCTGTGCTGCTGCCGGCGCGCCAAGCACCCGCCAGGCCCCGCATCCGCAGCTCTGGCCCGGGCCTCTCGAATGCAGTGGACTTCAAGCGCCACATCGAGGTGCTGCACTACCTGCTGCAAGCCTGGCCAGGTGAGCTGGCCCTCGCCCCCGCCCCCGCGCCGCCGATCGTAGCCAGGCCGCCGCTACGATGCTTTCTCCAGTGGCCAATTAGAGTCTCGGGCTTCAGGCAAGCCACGCCCCCTAGTCCGAATCCGCGCAGGCCCCCCGAGGCTCCGGAGCTCGTCCCGTACCTGCGGCCCAAACGACAGCCGCCGCTGCACTTGCCGCTAGCGAGCCCCGAAGTGGTGACTCGGCCCCGCGGCCGGGGCGGCCCCGAGAGTCCTCCGAGCAACCGCTACGCCGGTGACTGGAGCGTTTGCGGGCGGGACTTCCTGCCTTGTGGGCGGGACTTCCTGTCCGGGCCGGACTACGACCACGTGACGGGCAGCGACAGCGAAGACGAGGACGAAGAGGCTGGCGAGCCGACGGTGGCCACCGACTTCGAAGACGACTTCGAGGCTCCCTTCAACCCGCACCTGAACCTCAAAGACTTTGATGCCCTCATCATGGACCTGGAGAGAGAGCTCTCCAAGCAGATCAACGTGTGTCTGTGA

Related Sequences

bmy_19190T0 SequenceType object (3)

Length: 822 aa      View alignments
>bmy_19190T0
MAEPLLRKTFSRLRGREKLPRKKSDAKERGRPAQRPEPSPPEPEPQAPEGSQAGAEGPPSPEASRSPARGAYLQSLEPSSRRWVLGGAKPPDEATLGPGAAGSREPAGEIWYNPIPEEDPRLSAPELPGPQPGSAEPESLASPGAAPASPPNKASRTKSPGPARRLSMKMKKLPELRRRLSLRSTRAGRERERAAPAGSVISRYHLDSSVGTPGRAAVSEGARGLRAGYLSDGDSPERPAGPPSPTAFRPYEVGPSARTPPTALWGRLSLHLYGLGGLRPAPGATPRDLCCLLQVDGVARARTGPLRGGPDFLRLDHTFHLELEAARLLRALVLAWDPGVRRHRPCAQGTVLLPTVFRGCEAQQLAVRLEPQGLLYAKLTLSEQQEAPGTAEPRVFGLPLPLLVEREQSPGQVPLIIQKCVGQIERRGLRVVGLYRLCGSAAVKKELRDAFERDSAAVCLSEDLYPDINVITGQHAPSLSCLLLIQPSPQGSPCGPSGTSPLLLALFSPSCTYPPPVPLLPAPAESPASETSGALIRVGPVSTGILKDYLRELPTPLITQPLYQVVLEAMAREPPSRAPSSTEGTRGLLSCLPDVERNLAVCFGPVLLPARQAPARPRIRSSGPGLSNAVDFKRHIEVLHYLLQAWPGELALAPAPAPPIVARPPLRCFLQWPIRVSGFRQATPPSPNPRRPPEAPELVPYLRPKRQPPLHLPLASPEVVTRPRGRGGPESPPSNRYAGDWSVCGRDFLPCGRDFLSGPDYDHVTGSDSEDEDEEAGEPTVATDFEDDFEAPFNPHLNLKDFDALIMDLERELSKQINVCL*