Part of scaffold_2040 (Scaffold)

For more information consult the page for scaffold_2040 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

KCNT1 ENSTTRG00000002519 (Bottlenosed dolphin)

Gene Details

potassium channel, subfamily T, member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002368, Bottlenosed dolphin)

Protein Percentage 90.69%
cDNA percentage 92.67%
Ka/Ks Ratio 0.147 (Ka = 0.0395, Ks = 0.2685)

KCNT1 ENSBTAG00000018975 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025261, Cow)

Protein Percentage 90.78%
cDNA percentage 90.83%
Ka/Ks Ratio 0.07109 (Ka = 0.0443, Ks = 0.6225)

KCNT1  (Minke Whale)

Gene Details

potassium channel, subfamily T, member 1

External Links

Gene match (Identifier: BACU016145, Minke Whale)

Protein Percentage 94.21%
cDNA percentage 94.63%
Ka/Ks Ratio 0.14485 (Ka = 0.0346, Ks = 0.2387)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2241 bp    Location:2400..33139   Strand:+
>bmy_19215
CTGAGGATCCGGCTGTTCAACTTCTCCCTGAAGCTGCTGACCTGCCTGCTGTACATTGTCCGCGTCCTGCTGGAYGACCCGGCCCTGGGGATCGGATGGACCTGCGGCATCCAGCACCTGGAGCGCGCGGGCGACAACCTGTCCCTCCTGACGTCCTTCTACTTCTGCATCGTCACCTTCTCCACCGTGGGCTACGGAGACGTGACGCCCAAGATCTGGCCGTCCCAGCTGCTGGTGGTCGTCATGATCTGCGTGGCCCTCGTGGTGCTCCCGCTGCAGGTTGTGGGGCTGGGGGCTGTCACCCGTGTGTGTGCCCCCCCTCCCGGAGCCCCAGGCCACCTGGAGCTCACATGCTCTTCCCTGCAGTTTGAAGAGCTCGTCTACCTGTGGATGGAGCGGCAGAAGTCGGGGGGCAACTACAGCCGCCACCGGGCCCAGACGGAGAAGCACGTGATCCTGTGCGTCAGTTCCCTCAAGATCGACCTGCTCATGGACTTTCTGAACGAGTTCTATGCCCACCCCCGGCTGCAGATCCTCAAGCCTGAGAACAAGTTTCACGTCAAGTTTGCAGAAGCCACATTGGGGGGGCACCATAGCCCCGCTGGGCGGGCGCACCGTGGGGTGACATCCTCCCCACGCCCCAGGGAAGGCCAGGACTCACCCGAGCAGTGGCAGCGCATGTACGGGCGCTGCTCGGGCAACGAGGTCTACCACGTCCGCATGGGCGACAGCAAGTTCTTCCGCGAGTACGAGGGCAAGAGCTTCACCTACGCTGCCTTCCACGCGCACAAGAAGTACGGCCCCCGCCCCGCCCCGCCCCGCCCGGTCCAGGCCAGGGGCTGCAAGCACAACAGCTATGAAGACGCCAAGGCCTACGGCTTCAAGAATAAGCTGATCATCGTGTCGGCGGAGACGGCGGGCAACGGGCTGTACAACTTCGTCGTGCCGCTCCGGGCCTACTACCGGCCCCGCAGAGAGCTCAACCCCATCGTGCTGCTGCTGGACAACAAGCCTGACCACCACTTCCTGGAGGCCATTTGCTGCTTCCCCATGGTCTACTACATGGAGGGCTCCGTGGACAACCTGGACAGCCTGCTGCAGTGCGGCATCATCTACGCCGACAACCTGGTGGTGGTGGACAAGGAGAGTACCATGAGCGCCGAGGAGGACTACATGGCCGACGCGAAGACCATCGTCAGCGTGCAGACCATGTTCCGGCTCTTCCCCAGCCTCAGCATCACCACGGAGCTCACCCACCCGTCCAACATGCGGTTCATGCAGTTTCGTGCCAAGGACAGCTACTCTCTGGCTCTTTCCAAGCTGGAAAAGAGGGAGCGGGAGAACGGCTCCAACCTGGCCTTCATGTTCCGCCTGCCCTTCGCCGCCGGCCGCGTCTTCAGCATCAGCATGCTGGACACGCTGCTGTATCAGTCCTTCGTGAAGGACTACATGATCCCCATCACCAGGCTGCTCCTGGGGCTGGACACCACGCCGGGCTCGGGCTACCTCTGTGCCATGAAGGTCACAGAGGACGACCTGTGGATCCGCACCTACGGCCGCCTCTTCCAGAAGCTGTGCTCCTCCAGCGCCGAGATCCCCATCGGCATCTACAGGACCGAGTGCCACGTCTTCTCCTCCTCGGAGTCCCAGGTCTCGGTGAGCATGGGGGACCGCGAGGACGCCCGGGAGGCGAAGGGGCCCTGGGGCTCACGGGCAGGCACGGGCGGCGGCGGCGGCGCCCACGGCCGGCACGCGGTGGGCGGCGACTCGGCGGACCACCCGCTCCTGCGGCGCACGAGCCTGCCGTGGGCGCGGAGGCTGAGCCGCAAGGGCGCCGGGCACACGGGGAAGGCGGCGGCCGAGTGGATCAGCCAGCAGCGGCTCAGCCTGTACCAGCGATCCGAGCGGCAGGAGCTCTCCGAGCTGGTCAAGAACCGCATGAAGCACCTGGGGCTGCCCACCACCGGCTACGAGGATGTAGCAAATTTAACAGCCAGTGATGTCATGAATCGGGTAAACCTGGGATATTTGCAAGACGAGATGAACGACCACCAGAACACCCTGTCCTACGTGCTCATCAACCCCCCACCGGACACGCGGCTGGAGCCCAACGACATCGTGTATCTCATCCGCTCCGACCCCCTGGCCCACGTGGCCAGCAGCTCCCGGAGCCGGAAGAGCAGCTGCGGCAACAAGCTGGCTTCCTGCAGCCCCGAGACGCGGGACGAGACGCAGTTCTGA

Related Sequences

bmy_19215T0 Protein

Length: 747 aa      View alignments
>bmy_19215T0
LRIRLFNFSLKLLTCLLYIVRVLLDDPALGIGWTCGIQHLERAGDNLSLLTSFYFCIVTFSTVGYGDVTPKIWPSQLLVVVMICVALVVLPLQVVGLGAVTRVCAPPPGAPGHLELTCSSLQFEELVYLWMERQKSGGNYSRHRAQTEKHVILCVSSLKIDLLMDFLNEFYAHPRLQILKPENKFHVKFAEATLGGHHSPAGRAHRGVTSSPRPREGQDSPEQWQRMYGRCSGNEVYHVRMGDSKFFREYEGKSFTYAAFHAHKKYGPRPAPPRPVQARGCKHNSYEDAKAYGFKNKLIIVSAETAGNGLYNFVVPLRAYYRPRRELNPIVLLLDNKPDHHFLEAICCFPMVYYMEGSVDNLDSLLQCGIIYADNLVVVDKESTMSAEEDYMADAKTIVSVQTMFRLFPSLSITTELTHPSNMRFMQFRAKDSYSLALSKLEKRERENGSNLAFMFRLPFAAGRVFSISMLDTLLYQSFVKDYMIPITRLLLGLDTTPGSGYLCAMKVTEDDLWIRTYGRLFQKLCSSSAEIPIGIYRTECHVFSSSESQVSVSMGDREDAREAKGPWGSRAGTGGGGGAHGRHAVGGDSADHPLLRRTSLPWARRLSRKGAGHTGKAAAEWISQQRLSLYQRSERQELSELVKNRMKHLGLPTTGYEDVANLTASDVMNRVNLGYLQDEMNDHQNTLSYVLINPPPDTRLEPNDIVYLIRSDPLAHVASSSRSRKSSCGNKLASCSPETRDETQF*