Part of scaffold_2009 (Scaffold)

For more information consult the page for scaffold_2009 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PSMG1 ENSTTRG00000015370 (Bottlenosed dolphin)

Gene Details

proteasome (prosome, macropain) assembly chaperone 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014566, Bottlenosed dolphin)

Protein Percentage 99.65%
cDNA percentage 99.19%
Ka/Ks Ratio 0.06781 (Ka = 0.0016, Ks = 0.0232)

PSMG1 ENSBTAG00000013600 (Cow)

Gene Details

Proteasome assembly chaperone 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018085, Cow)

Protein Percentage 92.71%
cDNA percentage 91.9%
Ka/Ks Ratio 0.18102 (Ka = 0.0396, Ks = 0.2189)

PSMG1  (Minke Whale)

Gene Details

proteasome (prosome, macropain) assembly chaperone 1

External Links

Gene match (Identifier: BACU010445, Minke Whale)

Protein Percentage 99.0%
cDNA percentage 99.34%
Ka/Ks Ratio 0.96072 (Ka = 0.0051, Ks = 0.0053)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 921 bp    Location:90686..78009   Strand:-
>bmy_19226
ATGCGTCGTGCTGTGGAGCCGCAGTTGGGCCGGGAGGGTGTGAGGGCGGCTATGGCGGCAACGTTCTTCGGGGAGGTGGTGAGGGCGCCGTGCCGAGCCGGGACGGAGGACGAGGAGGAGGAGGAAGAGGAGGGGAGGAGGGAGACGCCCGAAGACGGGGAGGTCCGGCAGCAACTGTCGCGGAAGAGGGAGGTGCGGCTCCTTCGAAGACAAACAAAAACAACTTTGGAAGTTTCTCTGCTAGAAAAATATCCTTGCTCCAAGTTTATAATTGCTATAGGAAATAATGCAGTAGCATTTTTGTCATCATTCATCATGAATTCAGGAGTCTGGGAAGAAGTTGGTTGTGCTAAACTCTGGAATGAATGGTGTAGGACAGTGGACACTACACACCTGTCCCCCACAGAGGCTTTTTGTGTGTTTTATCACCTAAAATCGAATCCCTCGGTTGTGCTCTGTCAATGTAGTTGCTACGTTGCTGAAGATCAGCAGTATCAGTGGCTGGAAAAGGTTTTTGGCTCTTGTCCAAGGAAGAATATGCAAGTAACTATTCTTACATGTCGACATGTTACTGACTATAAAACTTCAGARTCTACCAGCAGTCTTCATACTCCTTTCCTGAAAGCCCTAAAAACACAGAATTTCAGAGAGCCTCCTTGCTGTTCACTGCTAGAACAACCAAATATCGTACATGACCTTCCTGCGGCAGTTCTGAGTTATTGTCAAGTATGGAAAATCTCTGCAATTCTGTACTTATGTTATACTGATGTGATGAAATTAGACCTAATCACAGTTGAAGCTTTTAAGCCTGTACTTTCTTCCAGAAGCTTGAAAAGTTTGGTTAAGAATATTCCCCAGAGCACAGAGATACTGAAGAAACTGATGACAACAAATGAGATTCAGAGTAACATTTACACATGA

Related Sequences

bmy_19226T0 Protein

Length: 307 aa      View alignments
>bmy_19226T0
MRRAVEPQLGREGVRAAMAATFFGEVVRAPCRAGTEDEEEEEEEGRRETPEDGEVRQQLSRKREVRLLRRQTKTTLEVSLLEKYPCSKFIIAIGNNAVAFLSSFIMNSGVWEEVGCAKLWNEWCRTVDTTHLSPTEAFCVFYHLKSNPSVVLCQCSCYVAEDQQYQWLEKVFGSCPRKNMQVTILTCRHVTDYKTSESTSSLHTPFLKALKTQNFREPPCCSLLEQPNIVHDLPAAVLSYCQVWKISAILYLCYTDVMKLDLITVEAFKPVLSSRSLKSLVKNIPQSTEILKKLMTTNEIQSNIYT*