Sequence detailsbmy_19230 (Coding sequence)

Part of scaffold_2009 (SequenceType object (1))

For more information consult the page for scaffold_2009 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LCA5LENSBTAG00000030993 (Cow)

Gene Details

Lebercilin-like protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000041408, Cow)

Protein Percentage 83.69%
cDNA percentage 88.41%
Ka/Ks Ratio 0.33322 (Ka = 0.0875, Ks = 0.2626)

Additional orthologs identified in other species via the OPTIC pipeline.

LCA5L (Human)   Lca5l (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1971 bp    Location:320442..300781   Strand:-
Raw sequence 
>bmy_19230
ATGTCATTGGCTGGTCTAACAGAAACAAATCTAGATGGACATTTCCCCAGTGTGGCCTTAGAAAACGGCAGGAGGTCTGCAAAATGCCAGAGCAGCAGCCCAGGTTTTCCCAGGAACAGCAACGATTCCGACAAGAGTGTTGATTACAACAGATCTCAGTGTTCCTGCAGAAGTTCAAGTTCTCACTACGATTATTCAGAAGACTTTCTCTCTGAATGTTCAGAAACCGCGGCTAAAAAGAATTATTTAGAGAAGSCTGTAGTAAAAGAAAAAAAGGAGAAGAAAAAGTATAATGTTTCTAAAATCTCCCAACCTAAAGGCCAGAAGGAAATCTCGGTGGAGAAAAAGCACAACTGGAATGCACCATTTTTAAATTCTCAGATCAGTGTGGCTGCCCAGAGACGAGATGCCATGGCTCACCGCGTACTCTCAGCGAGGCTTCATAAGATTAAAGAACTGAAAAATGAATTAGCTGATCTACACCGCAAACTGGAGGCCACAGTCATAGAAAACCAATTTCTGAAACAACTCCAGCTTAAGCACCTGAAAGCTATAGGAAAATATGAGAATTCACAAAATAATCTACCTCAAATTATGGTTAAACATCAGAATGAAGTAAAAAGTTTAAGGCAGCTACTCAGGAAATCCCAGGGAAAGGAAAGAGACGTGTCTAGGAAACTTAGAGAAACAGACAGCGAGCTGTTGAAGACTAAAGATGCCTTGCAGGCACTGCAGAAACTTTCTGAAGACAAAAATCTTGCAGAGAGGGATGAGCTTACTCAAAGATTGTCTGTTCTTACAACAAAAATGGAGGGAAATGACAAACAAATACAGAGCTTGGAGAAACAACTGAGGCTGAACAATAAAGCCTTTACTCAGCAGTTGGCCTTTGAGAACCGGAAGACCTCAGCAGCTCAAGCAGCTACAAAGACTCTGCAAATGGAAATAAAACACCTTCAACAAAAACTTAAGGAGAAGGGTCGAGAGCTGGAAATTAGAAACATCTATACTAACCAGATACTTAGAAATTTACGTGACAAAGAAGATTATCCAAAAGTTTCTTCAACAAAGTCAGTACAAGCAGACAGGAAAAGTGTTTCATTTACAAGTATGCGACACCAGGAAACCCAAAAATCGGAAGATGTTCCATCTTTGACAACTAAGGGTAAAAAGACAAGAGGAAACATTGTTCATAAAGAAAAATCGATTGAAATAATCCATGCAATTCCTCACTGTATCAATTTATCAAAGGAAGAGAAACATTTGGAAGCACAGCCATCTCTGGAGAATAYTGGACAACAGAGAGAGAGAACAGAAGATCAAGAAAAGAAAACCACTTTAGTGAAAGAAGAACAGGAACTACCACCAAAAAGAATTCAAGTAATCCATCCCGAAGGGGAAAGTGGTAAGGAAGACAATACAGTAAATGAAAAGTCTAAAAGAAGTCCAGAAATAAGTGAAATGGGCGAAATGCCAGCTAAAAATGCTGCTCCAAATATCAAAATACCCTWCAGACAAAGAAAGCATTAYTCATTCACAGAAGCGGTCGAAAACTTGCATCATGGGCTTCCTGCCTCAGGTGGGCTGGCCAATGCAGGCAGCACGAGGTACACTCATAGCACAGGCAAGCACCACAGCCACGGGGAAGAACTGAGGCTGGAGCATCCTACTGTCACCTATGAACCCTCTTTTGGTAAACCTTCCAGAACAAAAGCAAAAGACACAACTTTCAGAGAGAAGAAAAGCAGTCTAATGGAAGAACTCTTTGGATCAGGCTATGTCTTAAAAAATAACCAAACAAGCACTGCTGTTATGAAGGGGCCTGAGGAGACTTTGCAGAGTAAGAAGATGCATCATTTACCCCCTAGTCAGGCCTCCACCAGCAATGCTTTTGGAGATTCTAAAGTAACTGTGGTAAATTCTATTAAGTCATCTTCACCTACAGAAGGAAAGAGAAAAATAATTATTTAA

Related Sequences

bmy_19230T0 SequenceType object (3)

Length: 657 aa      
>bmy_19230T0
MSLAGLTETNLDGHFPSVALENGRRSAKCQSSSPGFPRNSNDSDKSVDYNRSQCSCRSSSSHYDYSEDFLSECSETAAKKNYLEKXVVKEKKEKKKYNVSKISQPKGQKEISVEKKHNWNAPFLNSQISVAAQRRDAMAHRVLSARLHKIKELKNELADLHRKLEATVIENQFLKQLQLKHLKAIGKYENSQNNLPQIMVKHQNEVKSLRQLLRKSQGKERDVSRKLRETDSELLKTKDALQALQKLSEDKNLAERDELTQRLSVLTTKMEGNDKQIQSLEKQLRLNNKAFTQQLAFENRKTSAAQAATKTLQMEIKHLQQKLKEKGRELEIRNIYTNQILRNLRDKEDYPKVSSTKSVQADRKSVSFTSMRHQETQKSEDVPSLTTKGKKTRGNIVHKEKSIEIIHAIPHCINLSKEEKHLEAQPSLENXGQQRERTEDQEKKTTLVKEEQELPPKRIQVIHPEGESGKEDNTVNEKSKRSPEISEMGEMPAKNAAPNIKIPXRQRKHYSFTEAVENLHHGLPASGGLANAGSTRYTHSTGKHHSHGEELRLEHPTVTYEPSFGKPSRTKAKDTTFREKKSSLMEELFGSGYVLKNNQTSTAVMKGPEETLQSKKMHHLPPSQASTSNAFGDSKVTVVNSIKSSSPTEGKRKIII*