Part of scaffold_2003 (Scaffold)

For more information consult the page for scaffold_2003 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HAS1 ENSTTRG00000009481 (Bottlenosed dolphin)

Gene Details

hyaluronan synthase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008986, Bottlenosed dolphin)

Protein Percentage 93.3%
cDNA percentage 93.42%
Ka/Ks Ratio 0.08995 (Ka = 0.0104, Ks = 0.1162)

HAS1 ENSBTAG00000017672 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023502, Cow)

Protein Percentage 75.23%
cDNA percentage 78.25%
Ka/Ks Ratio 0.18028 (Ka = 0.1746, Ks = 0.9684)

HAS1  (Minke Whale)

Gene Details

hyaluronan synthase 1

External Links

Gene match (Identifier: BACU008259, Minke Whale)

Protein Percentage 70.49%
cDNA percentage 75.17%
Ka/Ks Ratio 0.27224 (Ka = 0.2399, Ks = 0.8813)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1728 bp    Location:45631..32147   Strand:-
>bmy_19233
GCCCTAGCAATCCGCTGGTCCCGCCGCTGCTGCCTGCATCCAAGCTCACACTCTGCTCTCGTTCTCCCAGAGAAGACCCTGGACGTGCCCAAGCCCAGCCCCGCAGGCCGCCACTGCTCCGGCCTGGCCCGGAGGGTGCTGACCATCGCCTTCGCGCTGCTCATCCTGGGCCTCATGACCTGGGCTTACGCCGCCGGCGTGCCGCTGGCCTCGGATCGCTACGGCCTCCTGGCCTTCGGCCTCTACGGAGCCTTCCTCTCGGTGCACCTGGTGGCGCAGAGCCTCTTCGCGTACCTGGAGCACCGGCGGGAGGACCCCGCGTACCTGCGCCAGTGCCTGGTGTCCGCGCGCGCCCTCGTGTACCCGCGTGCGCGGCTGCACATCCTCATGGTGGTGGACGGCAACCGCGCCGAGGACCTCTACATGGTCGACATGTTCCGCGAGGTCTTCGCCGACGAGGACCCCGCCACCTACGTGTGGGAGAGCAACTACCACCAGCCGTGGGAACCTGCGGCGGCGGGCGCGGCGGGCGAGGGCGCCTACCGGGAGGTGGAGGCCGAGGATCCCGGGCGGCTGGCGGTGGAGGCGCTGGTGAGGACGCGCAGGTGCGTGTGCGTGGCGCAGCGCTGGGGCGGCAAGCGCGAGGTCATGTACACCGCCTTCAAGGCGCTCGGCGACTCGGTGGATTACGTGCAGGTCTGTGACTCAGACACGAGGCTGGACCCTGTGGCGCTGCTGGAGCTGGTGCAGGTGCTGGACGAGGACCCCCGGGTAGGGGCTGTTGGGGGCGACGTGCGGATCCTTAACCCTCTGGACTCCTGGGTCAGCTTCCTAAGCAGCCTGCGGTACTGGGTGGCCTTCAATGTGGAGCGGGCTTGTCAGAGCTACTTCCACTGCGTGTCCTGCATCAGTGGTCCCCTAGGCCTATACAGAAACAACCTCCTGCAGCAGTTCCTTGAGGCCTGGTACAACCAGAAGTTCCTGGGCACCCACTGCACCTTTGGGGATGACCGTCACCTCACCAACCGCATGCTCAGCATGGGCTATGCCACCAAGTACACCTCGCGGTCCCGCTGCTACTCGGAGACGCCCTCATCCTTCCTGCGCTGGCTGAGCCAGCAGACGCGCTGGTCCAAGTCGTACTTCCGCGAGTGGCTGTACAACGCGCTCTGGTGGCACCGGCACCACGCGTGGATGACCTACGAGGCGGTGGTCTCGGGCCTCTTCCCCTTCTTCGTGGCGGCCACGGTGCTCCGGCTCTTCTACGCGGGCCGCCCGTGGGCGCTGCTCTGGGTGCTGCTGTGCGTGCAGGGCGTGGCGCTGGCCAAGGCGGCCTTCGCGGCCTGGCTGCGGGGCTGCCCGCGGATGCTGATGCTCTCGCTCTACGCGCCCCTCTACATGGGCGGCCTCCTGCCCGCCAAGTTCCTGGCGCTGGCGACCATGAGCCAGAGCGGCTGGGGCACGTCAGGCCGCCGCCGGCTGGCCGCCAACTACGTGCCGGTGCTGCCGCTGGCCCTCTGGGCGCTGCTGCTGCTTGGCGGGCTGGTCCGCAGCGTGGTCCACGAGGCCCGGGCCGACTGGAGCGGCCCCTCCCGCGCGGCCGAGGCCCGCCACCTGGCCGCGGGGGCCGGCGCCTACGTGGGCTACTGGGCCATCATGCTGACCTTCTACTGGGTGCGGGTGCGGAGGCTCTGCCGGAGGCGGGCGGGGGGCTACCGCGTCCAGGTG

Related Sequences

bmy_19233T0 Protein

Length: 576 aa      View alignments
>bmy_19233T0
ALAIRWSRRCCLHPSSHSALVLPEKTLDVPKPSPAGRHCSGLARRVLTIAFALLILGLMTWAYAAGVPLASDRYGLLAFGLYGAFLSVHLVAQSLFAYLEHRREDPAYLRQCLVSARALVYPRARLHILMVVDGNRAEDLYMVDMFREVFADEDPATYVWESNYHQPWEPAAAGAAGEGAYREVEAEDPGRLAVEALVRTRRCVCVAQRWGGKREVMYTAFKALGDSVDYVQVCDSDTRLDPVALLELVQVLDEDPRVGAVGGDVRILNPLDSWVSFLSSLRYWVAFNVERACQSYFHCVSCISGPLGLYRNNLLQQFLEAWYNQKFLGTHCTFGDDRHLTNRMLSMGYATKYTSRSRCYSETPSSFLRWLSQQTRWSKSYFREWLYNALWWHRHHAWMTYEAVVSGLFPFFVAATVLRLFYAGRPWALLWVLLCVQGVALAKAAFAAWLRGCPRMLMLSLYAPLYMGGLLPAKFLALATMSQSGWGTSGRRRLAANYVPVLPLALWALLLLGGLVRSVVHEARADWSGPSRAAEARHLAAGAGAYVGYWAIMLTFYWVRVRRLCRRRAGGYRVQV