Part of scaffold_1977 (Scaffold)

For more information consult the page for scaffold_1977 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NFYC ENSTTRG00000010558 (Bottlenosed dolphin)

Gene Details

nuclear transcription factor Y, gamma

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010012, Bottlenosed dolphin)

Protein Percentage 96.12%
cDNA percentage 95.72%
Ka/Ks Ratio 0.32856 (Ka = 0.026, Ks = 0.079)

NFYC ENSBTAG00000021943 (Cow)

Gene Details

Nuclear transcription factor Y subunit gamma

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029254, Cow)

Protein Percentage 99.7%
cDNA percentage 96.91%
Ka/Ks Ratio 0.01674 (Ka = 0.0016, Ks = 0.0974)

NFYC  (Minke Whale)

Gene Details

nuclear transcription factor Y, gamma

External Links

Gene match (Identifier: BACU000389, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.4%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.019)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1134 bp    Location:54840..84945   Strand:+
>bmy_19249
ATGTGTTTGTTTTTAGTTGTCAAAATGTCCACAGAAGGAGGATTTGGTGGTGCTAGCAGCAGTGATGCCCAGCAAAGCCTACAGTCCTTCTGGCCTCGTGTCATGGAAGAAATCCGGAATTTAACAGTGAAAGATTTCCGAGTACAGGAACTCCCACTGGCTCGTATTAAGAAGATTATGAAACTGGATGAAGATGTGAAGCCCTTGCCCCATAGCCCAAGAGCAGGACATGAGGTAAGGGATGAACTGACTGGTTTGAATGACTTGCTGGTGATTGACAGGGAGGGCCTACGTCTGTTGCAGATGATCAGTGCAGAAGCCCCTGTGCTRTTTGCCAAGGCGGCCCAGATTTTTATCACTGAGTTGACTCTTCGAGCCTGGATCCACACAGAGGATAACAAGCGCCGGACTCTTCAGAGGAATGATATCGCCATGGCAATTACAAAATTTGATCAGTTTGACTTTCTCATCGATATTGTTCCAAGAGATGAGCTGAAACCACCAAAGCGTCAGGAGGAGGTGCGCCAGTCTGTGACTCCTGCCGAGCCCGTCCAGTACTACTTCACGCTGGCTCAGCAGCCCACTGCCGTCCAGGTCCAGGGGCAGCAGCAAGGCCAGCAGACCACCAGCTCCACAACCACCATCCAGCCTGGGCAGATCATCATTGCACAGCCTCAGCAGGGCCAGACCACACCCGTGACCATGCAGGTTGGAGAAGGTCAGCAGGTGCAGATTGTCCAGGCCCAGCCGCAAGGTCAAGCCCAGCAGGCCCAGAGTGGCACTGGACAGACCATGCAGGTGATGCAGCAGATCATTACGAACACAGGAGAGATCCAGCAGATCCCGGTGCAGCTGAATGCCGGCCAGCTGCAGTATATTCGCTTAGCCCAGCCTGTATCAGGCACCCAAGTTGTGCAGGGACAGATCCAGACGCTTGCCACCAATGCTCAACAGATCACACAGACAGAGGTCCAGCAAGGACAGCAGCAGTTCAGCCAGTTCACGGACGGACAGCAGCTCTACCAGATCCAGCAAGTCACCATGCCTGCCGGCCAGGACCTCGCCCAGCCCATGTTCATCCAGTCAGCCAACCAGCCCTCCGACGGGCAGGCCCCCCAGGTGACCGGCGACTGA

Related Sequences

bmy_19249T0 Protein

Length: 378 aa      View alignments
>bmy_19249T0
MCLFLVVKMSTEGGFGGASSSDAQQSLQSFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKPLPHSPRAGHEVRDELTGLNDLLVIDREGLRLLQMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQGQQQGQQTTSSTTTIQPGQIIIAQPQQGQTTPVTMQVGEGQQVQIVQAQPQGQAQQAQSGTGQTMQVMQQIITNTGEIQQIPVQLNAGQLQYIRLAQPVSGTQVVQGQIQTLATNAQQITQTEVQQGQQQFSQFTDGQQLYQIQQVTMPAGQDLAQPMFIQSANQPSDGQAPQVTGD*