Part of scaffold_2012 (Scaffold)

For more information consult the page for scaffold_2012 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TAF6L ENSTTRG00000002479 (Bottlenosed dolphin)

Gene Details

TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002323, Bottlenosed dolphin)

Protein Percentage 98.78%
cDNA percentage 97.79%
Ka/Ks Ratio 0.07928 (Ka = 0.0056, Ks = 0.0702)

TAF6L ENSBTAG00000009484 (Cow)

Gene Details

TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012482, Cow)

Protein Percentage 96.33%
cDNA percentage 94.27%
Ka/Ks Ratio 0.08045 (Ka = 0.0168, Ks = 0.2086)

TAF6L  (Minke Whale)

Gene Details

TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa

External Links

Gene match (Identifier: BACU005362, Minke Whale)

Protein Percentage 79.6%
cDNA percentage 84.06%
Ka/Ks Ratio 0.68835 (Ka = 0.166, Ks = 0.2412)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1977 bp    Location:35735..24915   Strand:-
>bmy_19271
ATGTCGGAGCGAGAAGAGCGGCGGTTCGTGGAGATCCCTCGGGAGTCCGTCCGGCTCATGGCAGAGAGCACAGGCCTGGAGCTGAGCGATGAGGTGGCGGCCCTGCTCGCGGAGGACGTGTGCTACCGTCTCAGAGAGGCCACCCAGAATAGCTCTCAATTCATGAAACACACCAAACGGCGGAAGCTGACTGTGGAGGATTTCAACAGGGCCCTCAGATGGAGCAGTGTGGAGGTGAGTGGGGTGCCGGCTGCGGAAGGCTCAGTTGGCACGAGCCCTCCTGCACGCCCAGCTCAGGGCTGGCAGTGCAGCGAGATGACCTCTGGACTTCCCGCAAACATAGGCTCCGTGCCCTGGTCGGTAGAGCACCTCTTCCCTCCCTGGATTCGGCCCAATCGTCTCTTCACTCAGGCTGTGTGTGGTTATGGGTCCCAGGAGGCGCTGCCCCTGCGCCCTGCCAGGGAGGGTGAGCTCTACTTCCCCGAGGACCGAGAGGTGAACCTGGTGGAGCTGGCCCTGGCCACCAACATCCCCAAAGGCTGCGCCGAGACAGCTGTGAGAGTTCATGTCTCCTACCTAGATGGCAAAGGGAACCTGGCCCCTCAAGGATCGGTGCCCAGYGCTGTGTCTTCACTGACTGATGACCTTCTCAAGTACTACCAGCAGGTGACTCGGGCTGTGCTGGGGGATGATCCACAGCTGATGAAGGTTGCTCTCCAGGACTTGCAGACCAACTCGAAGATCGCAGCGCTCCTGCCGTACTTTGTTTATGTGGTCAGTGGGGTGAAATCTGTAAGCCACGACCTGGAGCAGCTACACCGGCTCTTGCAAGTGGCACGGAGCCTAGTTCGGAACCCACACCTCTGCCTGGGGCCCTATGTCCGCTCCCTGGTAGGCAGTGTCCTCTACTGTGTCCTGGAGCCACTGGCTGCCTCCATCAACCCGCTGAATGACCACTGGACTCTGCGGGATGGAGCTGCCCTCCTGCTCAGCCACATCTTCTGGACTCATGGGGACCTTGTAAGTGGCCTCTATCAGCAGATCCTGCTCTCCCTGCAGAAGGTCTTGGCAGATCCTGCAGTAGAGCGAGTCCTGTACCCACACCTGTCCACTTACTGGACAAATTTGCAGGCTGTGCTAGATGATTATTCCGTATCCAATGCCCAGGTTAAAGCGGATGGGCACAAAGTCTATGGAGCCATTCTGGTGGCCGTAGAACGACTGCTGAAGATGAAGGCCCAGGCAGCAGAGCCCAACAAGGGTGGGCCAGGCAGCAGGGGGTGCCGGCGCTCAGACGAGCTGCCCTGGGACAGCCTTCTCCTGCAGGAGTCKCCCTCCGGGGGCAGCGCAGAGCCAGGCTTTGGGTCTGGTCTCCCGCTGCCGCCAGGAGGCGCGGGGCCGGAGGCTCCTTCCGCTTCGCTGACCCTGGCGGACATCTACCGGGAGCTCTACGCCTTCTTCGGTGACAGCTTGGCCACCCGCTTTGGCACGGGTCAGCCCGCGCCCACGGCCCCGCGGCCGCCTGGGGACAAGAAGGAGCCGGCGGCCGCCCCGGACTCGGTGCGGAAGATGCCGCAGCTGACCGCCAACGCCATGGTCAGCCCGCAGGGCGACGAGAGCCCCCGGGGCGGAGGCCCCCCGTCGGCCTCTGCGCCCGCCGCCTCTGAGAGCAGGCCGCTGCCGCGCGTGCACCGGGCGCGGGGGGCGCCCCGGCAGCAGGGCCCGGGCGCCGGCACCCGCGACGTCTTCCAGAAGAGCCGTTTCGCCCCGCGCGGGGCTCCTCACTTCCGTTTCATCATCGCCGGGCGGCAAGCAGGGAGGCGATGCCGCGGGCGCCTCTTCCAGACTGCCTTCCCCGCGCCGTACGGGCCCAGCCCGGCCTCTCGTTACGTGCAGAAGCTGCCCATGATCGGCCGCACCGGCCGCCCGGCCCGCCGCTGGGCGCTCTCGGACTACTCGCTGTACCTGCCGCTTTGA

Related Sequences

bmy_19271T0 Protein

Length: 659 aa      View alignments
>bmy_19271T0
MSEREERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNRALRWSSVEVSGVPAAEGSVGTSPPARPAQGWQCSEMTSGLPANIGSVPWSVEHLFPPWIRPNRLFTQAVCGYGSQEALPLRPAREGELYFPEDREVNLVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSSLTDDLLKYYQQVTRAVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLVRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSLQKVLADPAVERVLYPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVAVERLLKMKAQAAEPNKGGPGSRGCRRSDELPWDSLLLQESPSGGSAEPGFGSGLPLPPGGAGPEAPSASLTLADIYRELYAFFGDSLATRFGTGQPAPTAPRPPGDKKEPAAAPDSVRKMPQLTANAMVSPQGDESPRGGGPPSASAPAASESRPLPRVHRARGAPRQQGPGAGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPSPASRYVQKLPMIGRTGRPARRWALSDYSLYLPL*