Part of scaffold_2027 (Scaffold)

For more information consult the page for scaffold_2027 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HERC5 ENSTTRG00000003889 (Bottlenosed dolphin)

Gene Details

HECT and RLD domain containing E3 ubiquitin protein ligase 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003668, Bottlenosed dolphin)

Protein Percentage 88.18%
cDNA percentage 92.42%
Ka/Ks Ratio 0.80524 (Ka = 0.0535, Ks = 0.0664)

HERC5 ENSBTAG00000020538 (Cow)

Gene Details

E3 ISG15--protein ligase HERC5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000052996, Cow)

Protein Percentage 84.45%
cDNA percentage 89.31%
Ka/Ks Ratio 0.52213 (Ka = 0.0953, Ks = 0.1825)

HERC5  (Minke Whale)

Gene Details

HECT and RLD domain containing E3 ubiquitin protein ligase 5

External Links

Gene match (Identifier: BACU010625, Minke Whale)

Protein Percentage 82.28%
cDNA percentage 87.06%
Ka/Ks Ratio 0.6912 (Ka = 0.1316, Ks = 0.1904)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 4173 bp    Location:263741..133356   Strand:-
>bmy_19304
ATGAGAAACATGGGAAAGAAGCGGCTCTCCAGGAAGTCACAGAGCCTATTCACGGAAAAAGCGGCCCATGCCCTCCGGAGCCACATCGTCGTGGTTGAAATAGAAGCCCAGAGCGAGATAACAACACGTCTCAGGGATCCTCCGCTCAGAGCTCTTCCGTATCGTTCTCCACACCAAGAAGCTTTATCAGTCTTCCTTATGCTCCCAGAGTGTCCTGTCATGCATGATCCTAAGAACTGGATGACTCTGGTGGTTCCGTTTGCAGAGGCTGTTCATAACATGACTGGCCAATCTTCACAAGTCCTGAGTAAGTGTGATTACCTTTATATACCTGCAGAAAACCTCAGTCCCATTATTTTCAGTGATTTTCCATTTGTCTTTAATTTGCTCTCCAAAATTAAATTATTACAAGCTAATTCCCATATAAAAATGCTGATATGGAGAGATGATGGATGTAGTCAAAATTGTAAGCTCCGAACTGTATTACCAATTCAAATGCATCCATGTAGAGAGGGGAAACCAGAATCAGAAGGGAAAGAGTGCATGGATTTTGGGCAAATAATTCTGCAAGGAAAGGATGAATCCCCTCCATTTACACTTAGAGTCAGACAGAGTCACCTAGTTGAAGATGCTCTGCGTCAGTTAAGCCAAGCTGAAGTCACTGACCTCCGGAAAATATTAGTGGTTGAATTTATTAAAGAAATTCGTTCTGTGGGAGAAGGGGTGAAGTCCGAGTTCTTCCACGGATTTTTTTTCCTTCTCCTTTTCCCCCCTAAATTTGAGAAGAAGAGATATTTCCTCTTTGGGATGCTGTGTGGACTCTCCCTGTACAATTTTAATGTCGTCGACCTCCCTTTCCCACTGGCTCTGTTTAAGAAACTTCTGGACCAAGAGCCATCATTAGAAGATTTAAAAGAACTCGGTCTTCTTTTGGGGAAGAATTTGCAAGAAGTTCTAAATGATGAAGCTGATGACATTAAAGAAGTACTTGGCATACGTTTTTCTAATTCAAGGTATGGTCCAGGATACTGTAAATCACATCCTACGATACTGATGTTTTGGAATGCTTTCCATAAATTAACTTTGGATGAAAAGAGAAAATTCCTCTGTCCGGAGAGCGGAGGCACGGCCGTGGAGCCCGGGAAAACGGTGATGGAGCGGAGGCCACGGAGGAAGTCGCGGGGCGGCGGCGCGCGCTTGGCGTCCGGGCTGGTCCCCGCGTCCCGGCCCGCGGAGCCGCGGGCTGCGAAGCTCTGGCTCTTCCCCAGCGCCGCCCCGCTCTGCAGCGCGCTGTCCCGGAGGACCGAGGCGACGCGCCAGATGTGCTGCACGCGCGAACGCCTGGCGGTGCTGGAGCGCGGCGGGGCCGGCGTCGAGGTCCACCAGCTGCCGGCGGGGAGCGACGGCGCCAGGAAGCCGAAATGCATTAAGTTAGGGAAAAAAATGAAGATACATTCCATGGACCAAGGAGCAGAGCACCTGCTGGTTCTCTCCTCAGATGGAAAACCATTTGAGTACAACTATAGCRTAGAGCACGCAAGGTTTCAGTGCATTTTACAAGAAAAAAATACTATAATTCAGATCACATGTGGAGATTATCATTCACTTGCACTCTCAAAAGGTGGTGAGCTTTTTGCGTGGGGAAGGAACTTAGACGGCCAGCTTGGAGTTGGAAGAAAATGTGCCTCGAACCCTACACCGCAGATCGTGGAGCACCTCTCAGGAGTCCCCCTGGTTCAGATTTCTGCAGGAGAAGCCCACAGCATGGCCTTATCCATGTCGGGGAACGTTTACTCGTGGGGAAGAAACGACTGTGGACAGCTGGGCCTGGGCCACACCGACAATAAAGATTCTCCTTCCCTTATTGAAGTGCTGGACAATCAGAAAGTTGAATTTCTCGCTTGTGGTGGCTCTCACACTGCCCTGCTTACAAAGGATGGGCTGGTGTTTACTTTTGGTGCTGGAAAATATGGGCAACTCGGTCACAATTCAACACAGAATGAGTTAAGACCCTGTTTGGTAACTGGACTCGTCGGGAATAGAGTGACCCAGATAGCATGTGGAAGGCAGCACACACTTGCCTATGTTTCTGATTTGGGGAAGGTCTTTTCTTTTGGTTCTGGAAAAGAAGGACAACTGGGAAACGGTGGAACACACAATCAACTGATACCACGTCCCATGAAATTGCCATCAAATGAAGAACTCACATTTGAAAGCCGTACCTCAGAAAAGGAGTTAATAATGATTGCTGGAGGAGATCAAAGCATTTTGCTTTGGGTGGAAAAAGAGAATTCCTATGTTAATCTGAGGAGGAAAATTCCTACCTTGAATGAAGGCACTGTAAAGAGATGGATTGCTGACGTGGGGACTAAACAGTGGCAGAATACAAAGAGAAGAGCTGGAGAAACGATGTCTGTTCATTTGGACTTAAATACAGCAAGGGACACCTTTAAGGAGTTAACCCAGAAGGACTGGATTACTAACATGGTGATAACCACATGTCTGAGGGATACTCTGTTCAAAAATCTTCCATTTCATTCTCCACATCAAGAAGCTTTAGAAGTTTTCTTCCTTCTCCCAGAATGTCCTGTGATGCATGATTCTGACAACTGGGAGCGCCTGGTGGTCCCGTTTGCAGAGGCTGTTTATAAAATGCGTGCCCAGTCGTCAGAGGTCCTGGAGGAATATTGGGCATCTCTGCAAGAATCTGCTTTCATCAGACTGGTCCAGATGTTTAAAACAGCCGTCATTGCTCAGCTGAATTATTGGGCTGGAACTGCTGAGAATAACTATCACATTAAAACTCTCCTAGAAATGTTGAAAAAGCTGCACAGGGTAAACCAGACTAAATATCAGCTGCCTGAAAATATCTTCAAAGTAAATGAACTCACACACTGGCTTGATTTTTATGAAGATGCATCCAAAAGGACCACCTCGAAAATGAACGCAGACACTTCAATGGACATCCGCTGTCCTGTCATATTCAGTCATTTTCCATTTATCTTTAATATTCTGTCGAAAATTAAACTACTGTATGCAGACTCGTCTTTAAAAATGCAGGAGAAGAGATGGCGAGCTTGTATGAGGTTGGTTGGCATTGTGGAACAAGAAGAGTCTGAATTTGCTTTACTGCCCACCTTCAATCTAACAGTCAGAAGGGGTCACTTGATTGAGGATGTTTTGAATCAGCTAAATCAGTTTGAGAATGAAGATCTGAGGAGGGAGTTACTGGTTTCATTTAGTGGAGAAATTGGATTTGACTTTGGAGGAGTCAGAGCAGAGTTTTTCCATTGTCTCTTTGAAGAAATGACCCGGCCAGAATATGGGATGTTCACATATCCTGAAGAGGCTTCCTACATGTGGTTTCCTGTCAAGCCTAAATTTGAGAAGAAGAATTATTTCTTCTTTGGGGTTCTGTGTGGACTCTGCCTATTCAGTTGCAATGTTGCCAACATCCCTTTCCCACTGGCTCTGTTTAAGAAACTTTTGGACCAAGTGCCATCATTAGAAGACTTGAAAGAACTCAGTCCTGTTTTGGGAAAGAGTTTGCAGACACTTCTGGATGATGAAGGCGATGACTTTGGAGAAGTATTTCACATCCATTTTAATGTGCATTGGGACAAAAATGATGTAGACTTAGTTCCTAATGGAAGTCACATAGCTGTCGACCAGACTAACAAGAGAGACTATATTTCTAAGTATGTCGATTACATCTTCAACATCTCTGTAAAGGCAGTTTATGAAGAGTTTCAAAGAGGATTTTACAAATTGTGTGACAAGGAGATTATTGAATTTTTCCATCCTGAAGAACTCAGGGATGTGATTATTGGAAATACAGATTACGACTGGGAAACATTAGAAAAGAATGCACGTTACGAACAAGGATATGACAGTTCACATCCCACCATAGTGATGTTTTGGAAGGCTTTACACAAATTGACTTTGGAGGAAAAGAAAAAATTCCTTGCGTTTCTTACAGGAACGGACAGAATTCAAGTAAAAGGCTTAAAGAACATGAAAATAACATTTTGCTGTCCTGAATATTTGAATGAAAAAGATCCCATAAGGGCACAGACGTGTTATAGTGTCCTCTACCTCCCTAAATACTCTACAATGGAAAGAGTAGAAGAAGCGCTTCAAGTAGCCATCAACAGCAACAGAGGGTTTGGCTGA

Related Sequences

bmy_19304T0 Protein

Length: 1391 aa      View alignments
>bmy_19304T0
MRNMGKKRLSRKSQSLFTEKAAHALRSHIVVVEIEAQSEITTRLRDPPLRALPYRSPHQEALSVFLMLPECPVMHDPKNWMTLVVPFAEAVHNMTGQSSQVLSKCDYLYIPAENLSPIIFSDFPFVFNLLSKIKLLQANSHIKMLIWRDDGCSQNCKLRTVLPIQMHPCREGKPESEGKECMDFGQIILQGKDESPPFTLRVRQSHLVEDALRQLSQAEVTDLRKILVVEFIKEIRSVGEGVKSEFFHGFFFLLLFPPKFEKKRYFLFGMLCGLSLYNFNVVDLPFPLALFKKLLDQEPSLEDLKELGLLLGKNLQEVLNDEADDIKEVLGIRFSNSRYGPGYCKSHPTILMFWNAFHKLTLDEKRKFLCPESGGTAVEPGKTVMERRPRRKSRGGGARLASGLVPASRPAEPRAAKLWLFPSAAPLCSALSRRTEATRQMCCTRERLAVLERGGAGVEVHQLPAGSDGARKPKCIKLGKKMKIHSMDQGAEHLLVLSSDGKPFEYNYSXEHARFQCILQEKNTIIQITCGDYHSLALSKGGELFAWGRNLDGQLGVGRKCASNPTPQIVEHLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTDNKDSPSLIEVLDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVTGLVGNRVTQIACGRQHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPRPMKLPSNEELTFESRTSEKELIMIAGGDQSILLWVEKENSYVNLRRKIPTLNEGTVKRWIADVGTKQWQNTKRRAGETMSVHLDLNTARDTFKELTQKDWITNMVITTCLRDTLFKNLPFHSPHQEALEVFFLLPECPVMHDSDNWERLVVPFAEAVYKMRAQSSEVLEEYWASLQESAFIRLVQMFKTAVIAQLNYWAGTAENNYHIKTLLEMLKKLHRVNQTKYQLPENIFKVNELTHWLDFYEDASKRTTSKMNADTSMDIRCPVIFSHFPFIFNILSKIKLLYADSSLKMQEKRWRACMRLVGIVEQEESEFALLPTFNLTVRRGHLIEDVLNQLNQFENEDLRRELLVSFSGEIGFDFGGVRAEFFHCLFEEMTRPEYGMFTYPEEASYMWFPVKPKFEKKNYFFFGVLCGLCLFSCNVANIPFPLALFKKLLDQVPSLEDLKELSPVLGKSLQTLLDDEGDDFGEVFHIHFNVHWDKNDVDLVPNGSHIAVDQTNKRDYISKYVDYIFNISVKAVYEEFQRGFYKLCDKEIIEFFHPEELRDVIIGNTDYDWETLEKNARYEQGYDSSHPTIVMFWKALHKLTLEEKKKFLAFLTGTDRIQVKGLKNMKITFCCPEYLNEKDPIRAQTCYSVLYLPKYSTMERVEEALQVAINSNRGFG*