Part of scaffold_2004 (Scaffold)

For more information consult the page for scaffold_2004 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SFR1 ENSTTRG00000005650 (Bottlenosed dolphin)

Gene Details

SWI5-dependent recombination repair 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005334, Bottlenosed dolphin)

Protein Percentage 94.61%
cDNA percentage 96.57%
Ka/Ks Ratio 0.7262 (Ka = 0.0305, Ks = 0.0419)

SFR1 ENSBTAG00000047450 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053891, Cow)

Protein Percentage 88.73%
cDNA percentage 92.16%
Ka/Ks Ratio 0.25369 (Ka = 0.0517, Ks = 0.2038)

SFR1  (Minke Whale)

Gene Details

SWI5-dependent recombination repair 1

External Links

Gene match (Identifier: BACU004045, Minke Whale)

Protein Percentage 98.53%
cDNA percentage 99.18%
Ka/Ks Ratio 0.2144 (Ka = 0.004, Ks = 0.0188)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 615 bp    Location:292299..288868   Strand:-
>bmy_19315
ATGCAGACAGGACCTATGAGTGCAACCCTTAGGGAACGATTAAGGAAAACTAGATTTTCATTCAATTCCTGTTACAGTGTGGTAAAACGACTTAAAGTAGAGAGTGAAGAAAATGATCAGACCTTTTCAGAGAAACCAGCACCTTCAACCGAAGAAAACTGTTTGGAATTTCAAGAAAATTTTAAACACACAGACAGTGAATTTGAAGAAAGTACATATTTGAAAAATACCTTCAAGAATATCAATGCATGTGCATCTAAATCACTTGATTCTGAGTCATGCAGTRATCTCCGGAATGACTTTATGAATGAGAATCTTCCCAAACATGGATTAAACAAAGAAAAAGCAAAATTGGTGAAGCAGATTCAGGAGAAAGAAGACCTTCTTCGGAGGCTAAAACTAGTCAAAATGTATAGATCAAAGAATGACCTGTCTCAGTTACAGATGTTAATAAAGAAGTGGAGAAGCTGTAGCCAGCTATTGCTTTATGAGCTGCAGTCAGCTATGTCTGAGGAGAACAAGAAACTAAGCCTTACTCAGCTGATAGACCACTATGGGTTAGATGATAAATTGCTACACTATAACAGAAATGAAGAAGAATTTATAGGTGTTTAA

Related Sequences

bmy_19315T0 Protein

Length: 205 aa      View alignments
>bmy_19315T0
MQTGPMSATLRERLRKTRFSFNSCYSVVKRLKVESEENDQTFSEKPAPSTEENCLEFQENFKHTDSEFEESTYLKNTFKNINACASKSLDSESCSBLRNDFMNENLPKHGLNKEKAKLVKQIQEKEDLLRRLKLVKMYRSKNDLSQLQMLIKKWRSCSQLLLYELQSAMSEENKKLSLTQLIDHYGLDDKLLHYNRNEEEFIGV*