Part of scaffold_2020 (Scaffold)

For more information consult the page for scaffold_2020 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TARS ENSTTRG00000005996 (Bottlenosed dolphin)

Gene Details

threonyl-tRNA synthetase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005696, Bottlenosed dolphin)

Protein Percentage 91.71%
cDNA percentage 92.44%
Ka/Ks Ratio 0.39523 (Ka = 0.0442, Ks = 0.1118)

TARS ENSBTAG00000014261 (Cow)

Gene Details

Threonine--tRNA ligase, cytoplasmic

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018947, Cow)

Protein Percentage 90.91%
cDNA percentage 89.7%
Ka/Ks Ratio 0.20751 (Ka = 0.0633, Ks = 0.305)

TARS  (Minke Whale)

Gene Details

threonyl-tRNA synthetase

External Links

Gene match (Identifier: BACU015034, Minke Whale)

Protein Percentage 95.27%
cDNA percentage 95.95%
Ka/Ks Ratio 0.49505 (Ka = 0.0349, Ks = 0.0705)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1887 bp    Location:246318..267102   Strand:+
>bmy_19363
ATGGGAGACGAGAAGTCGGAGTTTCTTACATATGTATGCCTTAGTTTCCCCAAAGAGATTAAGTTTGCTCATGCTATATATTTAGTATATGTCCGTTTAAACCTGAAGCAAGAGTCATGTGAACAGGTAGGTGCCAGTGAGGAGAAACGAAAGGAAGGAGGCAAGAAGAAGAACAAAGAAGGCTCTGGGGATGGAGGTCGAGCAGAGTTGAATCCTTGGCCTGAATATATTAACATACGTCTTGAGATGTATAATAAACTAAAAGCAGAACACGATTCCATTCTGGCAGAAAAAGAAGAAAAAGATAGCAAGCCAATTAAAGTCACCTTGCCTGATGGTAAACAGTTGGATGCAGAATCCTGGAAAACTACACCATATCAAATTGCTTGTGGAATTAGTCAAGGCCTGGCTGACAACACTGTTATTGCTAAAGTGAATAAAGTCGTCTGGGACCTAGACCGTCCTCTGGAGGAAGATTGTACCTTGGAGCTTCTCAAGTTTGAGGACGAGGAAGCTCAAGCAGTATATTGGCACTCGAGTGCTCACATAATGGGTGAAGCCATGGAAAGAGTCTATGGTGGGTGTTTGTGTTACGGTCCACCAATAGAAAATGGATTCTATTACGACATGTACCTTGAAGAAGGGGGTGTGTCCAGCAACGATTTCTCTTCTTTGGAGGCTTTATGTAAGAAAATCATTAAAGAAAAACAAGCTTTTGAAAGATTAGAATACAACAAGTTCAAATGCAGGATATTGAACGAAAAAGTGAATACTCCAACTACCACAGTCTATAGGTGTGGCCCCTTGATAGATCTCTGCCGGGGTCCTCATGTCAGACACACTGGCAAAATCAAGACTTTGAAAATACACAAAAAACATGTATCAAAATCTACTGCTGATGAATTGACCTCCTTGGAAAATCTTCCTTGCCTTGAGGCCGCTCACTTTCTATCCTTGAAAGTTGGCCTTATGTTTGATCATCGGCCAAGATCCTGGCGAGAGTTGCCTCTGCGAGTAGCTGATTTTGGGGTGCTTCATAGGAATGAGCTGTCGGGAGCGCTCACAGGACTCACTCGGGTACGAAGATTCCAGCAGGATGACGCTCACATATTCTGTGCCATAGAGCAGATTGAGGATGAAATAAAAGGTTGTTTGGATTTTCTGCGTACAGTATATAGCATATTTGGGTTTTCTTTTAAACTGAACCTGTCTACTCGCCCGGAAAAATTCCTTGGAGATATTGAAGTATGGAATCAAGCCGAGAAACAACTTGAAAACAGTCTGAATGAGTTTGGTGAAAAGTGGGAATTAAATCCTGGAGATGGAGCTTTCTATGGTCCAAAGATTGACATACAGATTAAAGATGCCATTGGTCGGTACCACCAGTGTGCAACAATCCAGTTGGATTTTCAGTTGCCCATTAGATTTAATCTTACTTTTGTAAGCCATGATGGTGATGATAAGAAAAGGCCAGTGATTGTCCATAGAGCCATCTTGGGGTCAGTGGAAAGAATGATTGCTATCCTCACTGAAAACTATGGGGGCAAATGGCCCTTCTGGCTGTCTCCTCGCCAGGTAATGGTAGTTCCAGTGGGACCAACGTGTGATGAATATGCCCAAAAGGTACGGCAACAATTCCACGATGCTAAATTCATGGTGGACATTGATCTGGATCCGGGCTGTACATTAAACAAGAAGATCAGAAACGCACAGTTAGCACAGTATAACTTCATCCTAGTTGTTGGTGAGAAAGAGAAAACCAGCAGCACTGTCAATATCCGTACCAGAGATAACAAGGTGCACGGAGAACGTACTATTTCTGAAACCATCGAGTGGCTCCAGCAGCTCAAGCAGTCCCGCAGCAAACAGGCAGAAGAAGAATTTTAA

Related Sequences

bmy_19363T0 Protein

Length: 629 aa      View alignments
>bmy_19363T0
MGDEKSEFLTYVCLSFPKEIKFAHAIYLVYVRLNLKQESCEQVGASEEKRKEGGKKKNKEGSGDGGRAELNPWPEYINIRLEMYNKLKAEHDSILAEKEEKDSKPIKVTLPDGKQLDAESWKTTPYQIACGISQGLADNTVIAKVNKVVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEYNKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKTLKIHKKHVSKSTADELTSLENLPCLEAAHFLSLKVGLMFDHRPRSWRELPLRVADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAIEQIEDEIKGCLDFLRTVYSIFGFSFKLNLSTRPEKFLGDIEVWNQAEKQLENSLNEFGEKWELNPGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMVDIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKTSSTVNIRTRDNKVHGERTISETIEWLQQLKQSRSKQAEEEF*