Part of scaffold_2014 (Scaffold)

For more information consult the page for scaffold_2014 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PSMA8 ENSTTRG00000014586 (Bottlenosed dolphin)

Gene Details

proteasome (prosome, macropain) subunit, alpha type, 8

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013832, Bottlenosed dolphin)

Protein Percentage 95.35%
cDNA percentage 98.14%
Ka/Ks Ratio 1.59039 (Ka = 0.0212, Ks = 0.0133)

PSMA8 ENSBTAG00000017698 (Cow)

Gene Details

Proteasome subunit alpha type

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023541, Cow)

Protein Percentage 94.55%
cDNA percentage 94.39%
Ka/Ks Ratio 0.203 (Ka = 0.0319, Ks = 0.1573)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 663 bp    Location:116137..100285   Strand:-
>bmy_19368
ATGACTCAACAGGTTGGAATTCGAGGTACTGATATAGTTGTGCTTGGGGTCGAAAAAAAATCTGTTGCCAAGCTTCAAGATGAAAGAACTGTGAGGAAAATTTGTGCCCTTGATGACCATGTCTGCATGGCTTTTGCAGGACTGACTGCTGATGCAAGAGTAGTAATAAGCAGAGCTCGTGTGGAGTGCCAGAGTCATAAGCTTACAGTTGAGGACCCAGTCACTGTAGAATATATAACTCGCTTCATAGCAACCTTAAAGCAGAAATATACTCAAAGCAATGGACGAAGACCTTTTGGTATTTCTGCCTTAATTGTAGGTTTTGATGATGATGGTATCCCAAGATTATATCAGACTGATCCCTCTGGTACTTACCATGCTTGGAAGGCAAATGCAATAGGTCGAAGTGCTAAAACTGTCCAAGAATTTCTAGAAAAGAATTACACAGAAGATGCTATAGCAAACGACAGTGAAGCTATCAAATTAGCAATAAGAGCTTTGCTGGAAGTTGTCCAATCTGGTGGAAAAAACATTGAACTTGCTATAATAAGAAGAAACCAACCTTTGAAGATGTTTAGTGCCAAAGAAATTGAATTACAAGTAAATGAAACAGGAAAGGAAAAGGAAGAAGCAGAGAAGAAAAAATCAAAGAAGACTGCCTAA

Related Sequences

bmy_19368T0 Protein

Length: 221 aa      View alignments
>bmy_19368T0
MTQQVGIRGTDIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAGLTADARVVISRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVQEFLEKNYTEDAIANDSEAIKLAIRALLEVVQSGGKNIELAIIRRNQPLKMFSAKEIELQVNETGKEKEEAEKKKSKKTA*