Sequence detailsbmy_19369 (Coding sequence)

Part of scaffold_2014 (SequenceType object (1))

For more information consult the page for scaffold_2014 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SS18ENSTTRG00000007351 (Bottlenosed dolphin)

Gene Details

synovial sarcoma translocation, chromosome 18

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006956, Bottlenosed dolphin)

Protein Percentage 89.74%
cDNA percentage 89.39%
Ka/Ks Ratio 0.24351 (Ka = 0.016, Ks = 0.0658)

SS18ENSBTAG00000011531 (Cow)

Gene Details

protein SSXT

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000015327, Cow)

Protein Percentage 84.13%
cDNA percentage 84.3%
Ka/Ks Ratio 0.29009 (Ka = 0.1254, Ks = 0.4322)

Additional orthologs identified in other species via the OPTIC pipeline.

SS18 (Human)   Ss18 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1404 bp    Location:141793..303870   Strand:+
Raw sequence 
>bmy_19369
CCTCCCCGCGTTCTCGACGTGGTTCGGCCCGAGAGGCCGGCGTCTTTCCCCCAGTTTGCCGTTCACCCGGAGCGCTCGGGACTTGCCGATAGTGGTGACGGCGGCAACATGTCCGTGGCGTTCGCGGCCCCGAGGCAGCGCGGCAAGGGGGAGATCACTCCCGCTGCGATTCAGAAGATGTTGGATGAAAATAACCATCTTATTCAGTGTATAATGGACTATCAGAATAAAGGAAAGACCTCAGAGTGTTCTCAGTATCAACAGATGCTGCATACAAACTTGGTCTACCTTGCTACAATAGCAGATTCTAATCAAAACATGCAGTCTCTTTTACCAGCACCACCCACACAGAATATGCCTATGGGTCCTGGAGGGATGAATCAGAGCGGCCCTCCCCCACCTCCACGCTCACACAACATGCCTTCAGATGGAATGGTAGCTGGGGGTCCTCCTGCACCACACATGCAGAACCAGATGAACGGCCAGATGCCTGGGCCTAACCATATGCCTATGCAGGGACCTGGACCCAATCAACTGAATATGACAAACAGTTCCATGAATATGCCTTCAAGTAGCCACGGGTCCATGGGAGGTTACAGCCATTCCGTGCCATCGTCCCAGAGCATGCCGGTACAGAACCAGATGACCATGAGTCAAGGGCAGCCGATGGGAAACTATGGCCCCAGACCAAATATGAATATTCAACCAAACCAAGGTCCAATGATGCACCAGCAGCCTCCTTCTCAACAGTACAACATGCCTCAGGGAGGCCCACCACAGCAGTACTCAGGCCAGGAAGACTATTATGGGGACCAGTACAGTCATGGTGGACAAGGTCCTCCAGAAGGCATGAACCAGCAATATTACCCTGATGGTCATAATGATTACGGTTATCAGCAACCGTCGTATCCTGAACAAGGCTACGATAGGCCTTATGAGGATTCCTCACAACATTACTACGAAGGAGGGAATTCACAGTATGGCCAACAGCAAGATGCTTACCAAGGACCACCTCCCCAACAGGGATATCCACCCCAGCAGCAGCAGTACCCAGGGCAGCAGGGCTATCCAGGACAGCAGCAGGGCTACGGTCCTTCGCAGGGTGGTCCAGGTCCACAGTACCCTAACTACCCGCAGGGGCAAGGGCAGCAGTACGGAGGTTACAGACCAGCCCAGCCTGGGCCACCCCAGCCCCCGCAGCAGAGGCCTTACGGGTATGACCAGGATGTAAGTGAACTTTTCATGGTAGACAATAGRGAACCACAGCTGATAATGACAAAACTAAGTCTCTCCTTACAAATAGTTTATCTTCCTGAAAACCTTATTACAGAACAGAAAACTTGTAGCTTGCTGGCTGACATGGATTTTTACTTGTACGTTGGCTTTATGAACTTCGATGACTGA

Related Sequences

bmy_19369T0 SequenceType object (3)

Length: 468 aa      View alignments
>bmy_19369T0
PPRVLDVVRPERPASFPQFAVHPERSGLADSGDGGNMSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVAGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYSHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMNIQPNQGPMMHQQPPSQQYNMPQGGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPAQPGPPQPPQQRPYGYDQDVSELFMVDNREPQLIMTKLSLSLQIVYLPENLITEQKTCSLLADMDFYLYVGFMNFDD*