Sequence details bmy_19392 (Coding sequence)

Part of scaffold_2031 (Scaffold)

For more information consult the page for scaffold_2031 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NRDE2 ENSTTRG00000013583 (Bottlenosed dolphin)

Gene Details

NRDE-2, necessary for RNA interference, domain containing

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012890, Bottlenosed dolphin)

Protein Percentage 96.21%
cDNA percentage 97.03%
Ka/Ks Ratio 0.40588 (Ka = 0.0213, Ks = 0.0524)

C14ORF102 ENSBTAG00000005427 (Cow)

Gene Details

UPF0614 protein C14orf102 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007147, Cow)

Protein Percentage 82.82%
cDNA percentage 84.94%
Ka/Ks Ratio 0.17023 (Ka = 0.0889, Ks = 0.5221)

Additional orthologs identified in other species via the OPTIC pipeline.

NRDE2 (Human)   Nrde2 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3204 bp    Location:178099..140539   Strand:-
Raw sequence 
>bmy_19392
ATGCTGCGCTCCTTCCTGGGGAGGGAGCTTGAATTAGACTGGCTGAGCAACCCAAGCTTTTGTGTTGGAACCGTAACATCTCTGGGCCAACAAACTGAAGAGGCCACAGCCTTTGTTTCTGAAGAGTCACTACTGACCAGGAGTCCTCTGAATTCAGAGCCTTCAGATGAAAGTGACACTAACAGAAAGCCCAAACAAACAAGCAGAAAAAAGAAGAAAGAGAAGAAGAAGAAAAGGAAGCATCAGCACCACAAGAAAACCAAGAGAAAACGTGGGCAGTCAAGTAGCAGTGGATCTGAGTCATATACTGATTCTGAAAAGGACAGATCTTCCAGAAGCATCAGAGACAGTAAAAAGGAATCAGAGAAACCGAATCAAGAAAATAATGCCACTGCTGATATTGGACGTCACTTTGTTTGGCTTGAGGACATTCAGGCTCTGACGGGAGAAACCTTCAGAACAGATAAGAAGCCGGATCCTGCAAACTGGGAGTATAAGTCTCTTTACCGAGGAGATGTAGCAAGATACAAGAGGAAAGGAGACTCCTGCCTTGGCATTAACCCTAAGAAGCAGTGTGTATCTTGGGAGGGGACTTCCACAGAAAAGAAGCGGTCACACAAGCATGTCGAGCGCTACTTTACAAAGAAGAGTGTGGGATTAATGAACATTGACGGAGTTGCCATTAGCAGTAAAACTGAGCCTCCCTCATCGGAGTCGATCTCATTTATCCCAGTGAAGGGTGCAGAGGATGTGGTTTCCCCTGTTACAACCTGGTTGAACCCTCTGGGGATTTATGATGAAGCCACCACGCAGTGGTTACAAGGCCGGGGTCCTTCAGAGCAAGAATCCAAGCAGCCAGATTCACAGCCCAACAGAGAGAGCGTGCTTCTCAAGGCCAAGGTGGAGGAGTTTAACAGGAGGGTATGGGAGAATCCTCGGGATGTTCAGCTGTGGATGGCATTTGTTGCTTTTCAGGACGAGGTCATGAGAAGTCCGGGCCTGTATGCCATTGAGGAAGGAGAGCAGGAAAAGCGGAAGCGGTCCCTGAGGCTGGTTCTGGAGAAGAAGCTGGCTATTCTGGAACGGGCCGTGGAAAGCAACCCGAGCAGCGTGGATCTGAAACTCGCCAAGCTGCAGCTCTGCACCGAGTTCTGGGAGCCCTCCACTCTGGTCAAAGAGTGGCAGAAACTGATATTTTTACATCCCAACAATACAGCCCTTTGGCAGAAATACCTTTTATTTTGCCAGAGCCAGTTTAGCACCTTTTCCATATCAAAAATTCAGAGTCTTTATGGAAAATGCTTGAGTACTTTGTCTGCTGTTAAGGACGGCAGCATCTTGTCCCACCCTGAGCTGCCTGGCACCGAGGAGGCCATGTTTGGAATGTCTAAATCGATAAAACTGATTTTTAAAAAAGCCCTCTTTCTTCAGCAGTGCCACTTTCTGCGGCAGGCTGGTCACTCCGAGAAGGCCGTCTCTCTGTTCCAGGCAATGGTTGACTTCACCTTCTTCAAACCCGACAGTGTGAAAGACCTGCCTACCAAAGGACAGGTGTTGTTTGATGATATTGGACAGTCTCTGATCCGACTTTCCAGCCCGGATCTTCAGTTTCGGCTGATTGCAGCCTTTCTGCAGTTCTTGGGTGTGCCTTCCGGCTTCAGCCCTCCGGCCTCCTGCCTCTATCTGGCCATGGATGAGAACAGCATCTTTGACAATGGACTTTAYGATGAAAAGCCCTTGACTTTTCTCAACCTTTCATTTTCCGGCGTCAGCTGTGTCGGACGCACAGACCAACTGAGTTGCCGGCACTGGACCAGGGGTCACAGTCGAGAGGGCGAGGAGTTCATCCGCAGCATCTTCCACCTCGTGATGCCTTTGTTTTCAGGCAAGGAGAGGTCTCAGCTCTGCTTCTCCTGGTTACAGTACGAGATTGCAAAGGTCGTTTGGTGTCTGCACACTAAAAACAAGAAGAGATTAAAATCACAAGGAAAGAACTGCAAAAAACTAGCCAAGAATCTCCTTAAGGAGCCAGACAACCGCAACAATTTTTGCCTCTGGAAGCAGTATGCGCATCTGGAGTGGTTGCTCGGCAACACAGAGGATGCCAGAAAAGTTTTCGATACAGCACTCGGCATAGCAGGGAGCAGAGAACTGAAGGACCATGAGCTGTGTGAGCTCGGTCTCCTCTACGCCGAGCTGGAGGTGGAGCTGTTGCCGGACGTGAGGGGGGCCGCCCCAGCCCGAGCCATTCACGTATTGACCAGACTGACCGAGAATGGGGCCTACGGGCCCTACACCGGGCAAGTCTCGGCCGTTCACATTTTGAAAGCTCGGAAGGCTTATGAACATGCGCTGCAGGACTGTTTGGGGGAGAGCTGTGTCTCCGATCCAGCTCCCGCCGATTCCTTTAGCCGCCTGATTAGCCTGGTTAAATGCTTTATGCTCTTCCAGTATTTGACCATAGGGATCGACGCTGCTGTGCGGATATATGAGCAGGTATTTGCAAAACACCAGGTCTCTGTTTCCGCAGAGGGCCCTGGTCTGGAGGGCAGTGCCAGCCCCCAGAGCCTGAGCAGCGTCCTCGAGGCCGTCACCCTGACACACACGAGCCTGCTCAGGTTCCACATGAAAGTCGCCGTCTACCCGCTGGCTCCTCTGCGAGAGGCTCTCTCGGAGGCTTTAAAGTTGTATCCGGGCAACCAGGTTCTTTGGAGGTCGTATGTACAGATTCAGAATAAGTCCCACAGTGCCAGTAAGACCAGAAGATTCTTCGATGCGATCACCAGGTCTGCCAAACCCTTGGAGCCGTGGTTGTTTGCAATTGAAGCTGAGAAAATGAGGAAAAGACTAGTGGAAACCGTGCAGAGGGTAGACGGTAGAGAGGTCCACGCCACCATTCCCGAGACTGGCCTGACGCATCGGATCAGAGCCCTGTTTGAAAATGCGATGCGGAGTGACTACGGCAGCCAGTGCCCCTTACTGTGGAGGATGTATTTGAATTTTTTGGTTTCCTTAGGAAATAAAGAAAGAAGCAAAGGTGTGTTCTACAAAGCACTTCAGAATTGTCCTTGGGCAAAGGTGCTGTACCTGGATGCCGTGGAGTACTTCCCCGATGAGATGCAGGAGATCCTGGACCTGATGACGGAGAAGGAGCTSCGGGTGCGCCTGCCGCTGGAGGAGCTGGAGCTTCTGCTTGAGGACTAG

Related Sequences

bmy_19392T0 Protein

Length: 1068 aa      View alignments
>bmy_19392T0
MLRSFLGRELELDWLSNPSFCVGTVTSLGQQTEEATAFVSEESLLTRSPLNSEPSDESDTNRKPKQTSRKKKKEKKKKRKHQHHKKTKRKRGQSSSSGSESYTDSEKDRSSRSIRDSKKESEKPNQENNATADIGRHFVWLEDIQALTGETFRTDKKPDPANWEYKSLYRGDVARYKRKGDSCLGINPKKQCVSWEGTSTEKKRSHKHVERYFTKKSVGLMNIDGVAISSKTEPPSSESISFIPVKGAEDVVSPVTTWLNPLGIYDEATTQWLQGRGPSEQESKQPDSQPNRESVLLKAKVEEFNRRVWENPRDVQLWMAFVAFQDEVMRSPGLYAIEEGEQEKRKRSLRLVLEKKLAILERAVESNPSSVDLKLAKLQLCTEFWEPSTLVKEWQKLIFLHPNNTALWQKYLLFCQSQFSTFSISKIQSLYGKCLSTLSAVKDGSILSHPELPGTEEAMFGMSKSIKLIFKKALFLQQCHFLRQAGHSEKAVSLFQAMVDFTFFKPDSVKDLPTKGQVLFDDIGQSLIRLSSPDLQFRLIAAFLQFLGVPSGFSPPASCLYLAMDENSIFDNGLYDEKPLTFLNLSFSGVSCVGRTDQLSCRHWTRGHSREGEEFIRSIFHLVMPLFSGKERSQLCFSWLQYEIAKVVWCLHTKNKKRLKSQGKNCKKLAKNLLKEPDNRNNFCLWKQYAHLEWLLGNTEDARKVFDTALGIAGSRELKDHELCELGLLYAELEVELLPDVRGAAPARAIHVLTRLTENGAYGPYTGQVSAVHILKARKAYEHALQDCLGESCVSDPAPADSFSRLISLVKCFMLFQYLTIGIDAAVRIYEQVFAKHQVSVSAEGPGLEGSASPQSLSSVLEAVTLTHTSLLRFHMKVAVYPLAPLREALSEALKLYPGNQVLWRSYVQIQNKSHSASKTRRFFDAITRSAKPLEPWLFAIEAEKMRKRLVETVQRVDGREVHATIPETGLTHRIRALFENAMRSDYGSQCPLLWRMYLNFLVSLGNKERSKGVFYKALQNCPWAKVLYLDAVEYFPDEMQEILDLMTEKELRVRLPLEELELLLED*