Sequence detailsbmy_19400 (Coding sequence)

Part of scaffold_2038 (SequenceType object (1))

For more information consult the page for scaffold_2038 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ZNHIT3ENSTTRG00000011955 (Bottlenosed dolphin)

Gene Details

zinc finger, HIT-type containing 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011337, Bottlenosed dolphin)

Protein Percentage 97.42%
cDNA percentage 97.42%
Ka/Ks Ratio 0.23924 (Ka = 0.0147, Ks = 0.0613)

ZNHIT3ENSBTAG00000012672 (Cow)

Gene Details

Zinc finger HIT domain-containing protein 3

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000045729, Cow)

Protein Percentage 85.9%
cDNA percentage 90.17%
Ka/Ks Ratio 0.3914 (Ka = 0.0775, Ks = 0.198)

Additional orthologs identified in other species via the OPTIC pipeline.

ZNHIT3 (Human)   Znhit3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 471 bp    Location:117175..105719   Strand:-
Raw sequence 
>bmy_19400
ATGGCGTCGCTCAATTGCAGCACCGCTGTCTGCGTTATCTGTTTGGAGAAACCCAAATACCGCTGCCCCGCCTGCCGCGTGCCCTACTGCTCGTTGACCTGCTTCCGGGAGCACAAAGAGCAGTGCAACCCTGAAACTCGTCCTGTCGAGAAAGAAAGAAGATCGCATCTTACTGCAAAAACTAAAAAGCCTGTGGAAAACACAGATGATGATGACGACTCTGTAGCTGATTTTCTCAGTAGTGATGAGGAAGAGGACAGAGTTTCTTTGCAGAATTTAAAGAATTTAGGGGAGTCTGCAGCGCTGAGAAGCTTACTGCTCAGTCCACACCTTAGACAGTTGATGGTCAACCTCGATCAGGCAGACGACAAGGCAAAGCTCATGCGAGCCTGCATGCAGGAGCCTTTGTTTTTGGAGTTTGCTGACTGCTGTTTAAGGATCGTGGAACCATCCCCGAACGAGGATTCTTAA

Related Sequences

bmy_19400T0 SequenceType object (3)

Length: 157 aa      View alignments
>bmy_19400T0
MASLNCSTAVCVICLEKPKYRCPACRVPYCSLTCFREHKEQCNPETRPVEKERRSHLTAKTKKPVENTDDDDDSVADFLSSDEEEDRVSLQNLKNLGESAALRSLLLSPHLRQLMVNLDQADDKAKLMRACMQEPLFLEFADCCLRIVEPSPNEDS*