Part of scaffold_2032 (Scaffold)

For more information consult the page for scaffold_2032 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BT.11942 ENSBTAG00000023907 (Cow)

Gene Details

collagen alpha-1(XVIII) chain precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000034542, Cow)

Protein Percentage 85.34%
cDNA percentage 85.29%
Ka/Ks Ratio 0.24496 (Ka = 0.1001, Ks = 0.4086)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2304 bp    Location:307524..269137   Strand:-
>bmy_19416
ATGGAGGGGTCCGGGTTTGGTGGCGACCTGGAGAGCCTCCGCGGCCCTCGAGGCGTCCCCGGCCCCCCTGGGCCCCCTGGCGTCCCAGGCCTGCCCGGAGAGCCAGGCCGCTTCGGGATGAACAGCTCGGACGTCCCCGGACCCGCAGGCCTTCCCGGAGTGCCTGGGCGGGATGGGCCCCCCGGGCTTCCTGGGCCCCCAGGACCCCCAGGTCCTCCAGGAAAAGATGGGCAACCAGGACAGACCGGCCAGAAAGGCAGCCTTGGCGAGGCGGGCGCCGCAGGACCCAAGGGAAGCAAGGGAGACCCCGGCCCCATCGGCACGCCTGGGGAGCACGGCCTGGCAGGACGCCCCGGACCAGCAGGACCCGCAGGACCACCAGGGCCCCCGGGCCCCCCCGGGCCCCCAGGCCCCGGACTCGCTGCGGGGTTTGACGACATGGAGGGCTCCGGGGGCCCCTTCTGGTCGGCAGCCCGAGGTGCCAGTGGGCCGCAGGGGGATCCTGGAGTCATGGGGCCACCAGGGACCAAGGGACCAAAAGGAGAAAAAGGGCCCCAGGGAGAGAAAGGACCAGCCGGGCCGAAGGGAGACCTGGGCTCCAGAGGCCAGCAGGGCCTCCCGGGACCCAAGGGCGAGAAGGGTGAGCCGGGCATGGTCTTCAGCCCTGACGGCAGAGCGCTGACCTCCGCCCAGAAAGGAGCCAAGGGTGAGCCTGGCTTCCGAGGACCCCCGGGTCCCTACGGGCGGCCCGGGCACAAGGGAGAGATTGGCTTCCCTGGACGGCCGGGGCGCCCCGGGATGAATGGACTGAAAGGGGAGAAAGGGGAGCCAGGAGATGCCAGCGTGGGATTCAGCGCGAGGGGTCCACCCGGCCCACCTGGGCCCCCAGGGCCCCCGGGCCCTCCCGGGACTCCGGTCTATGACAGCAACGCGTTTGTGGAGTCTGGCCGCCCTGGACCCCCGGGATTGCCAGGGCACCAGGGGCCTTCTGGACCGAAGGGTGACAAAGGAGAAGTGGGCCCACCCGGGCCACCAGGGCAGTTCCCGTTCGACCTCCTGCACCTGGGCGCTGAGATGAAGGGGGAGAAGGGCGACCAAGGGGCCGCCGGGCAGAAAGGAGAAAGGGGCGAGCCCGGGGGCGGCGGGTTCTTCAGCTCCAGCGTGCCTGGCCCCCCCGGCCCGCCAGGCTACCCTGGGATTCCGGGGCCCAAGGGAGAGAGCATCCAGGGCCAGCCTGGCCCTCCTGGACCTCAGGGACCCCCTGGCATCGGCTACGAGGGACACCAGGGGCCTCCTGGGCCCCCCGGACCTCCAGGGCCCCCGGGACCCCCATCCTTTCCTGGCCCTTACAGGCAGACTATCAGTGTTCCTGGCCCCCCAGGCCCACCTGGGCCCCCAGGACCGCCCGGATCCATGGGCACCTCCTCAGGGCAGGTGAGGGTCTGGGCCACGTACCAGACCCTGCTGGACCAGGTGCCCGAAGTGCCAGAGGGCTGGCTCGTCTATGTGGCCGACAGGGAGGAGCTGTACGTCCGGGTCCGGAACGGGTTCCGGAAGGTTCTGGACAACGAGGTGGCCGCTTTGCAGCCCCACGTGGTGCAGCTGCACGAGGGCAACCCGTACCCCCGCCGGGAGCCCCCGCCCCCCACAGCGCGGTCCTGGCGGGCTGACGACATCCTGGCCGGTCCCCCGCGCTTGACACACGCCCAGCCCTACCCCGGGGCCCCGCACCCCGGCGCCTACGCGCACCTCCGGCCGGCAACCCCCACGGCCTCACCCGCCCACACTCACCACGACTTCCAGCCGTCGGGAGGCCTTCGCGGCATCCGCGGCGCCGACTTCCAGTGCTTCCAGCAGGCGCGCGCCGCGGGGCTGGCGGGCACCTTCCGCGCCTTCCTCTCCTCGCGGCTGCAGGACCTCTACAGCATCGTGCGCCGCGCAGACCGCGCCGCCCTGCCCATCGTCAACCTCAGAGATGAGGTGCTGTCTCCCAGCTGGGAGGCCTTGTTCTCGGGCTCCGAGGGCCAGCTGAAGCCCGGTGCCCGCATCTTCTCTTTCGACGGCAGAGACGTCCTACAGCACCCCGCCTGGCCCCAGAAGAGCTTGTGGCACGGCTCGGACCCCAGTGGGCGCCGGCTGACGGAGAGCTACTGCGAGACGTGGCGGACTGAGGCCAGGGCGGCCACGGGCCAGGCCTCCTCGCTGCTGGCGGGCCGGCTGCTGGAGCAGAAGACGGCGGGCTGCTACAACGCCTTCATCGTCCTCTGCATTGAGAACAGCTTCATGACCTCCTCCTCCAAGTAG

Related Sequences

bmy_19416T0 Protein

Length: 768 aa      View alignments
>bmy_19416T0
MEGSGFGGDLESLRGPRGVPGPPGPPGVPGLPGEPGRFGMNSSDVPGPAGLPGVPGRDGPPGLPGPPGPPGPPGKDGQPGQTGQKGSLGEAGAAGPKGSKGDPGPIGTPGEHGLAGRPGPAGPAGPPGPPGPPGPPGPGLAAGFDDMEGSGGPFWSAARGASGPQGDPGVMGPPGTKGPKGEKGPQGEKGPAGPKGDLGSRGQQGLPGPKGEKGEPGMVFSPDGRALTSAQKGAKGEPGFRGPPGPYGRPGHKGEIGFPGRPGRPGMNGLKGEKGEPGDASVGFSARGPPGPPGPPGPPGPPGTPVYDSNAFVESGRPGPPGLPGHQGPSGPKGDKGEVGPPGPPGQFPFDLLHLGAEMKGEKGDQGAAGQKGERGEPGGGGFFSSSVPGPPGPPGYPGIPGPKGESIQGQPGPPGPQGPPGIGYEGHQGPPGPPGPPGPPGPPSFPGPYRQTISVPGPPGPPGPPGPPGSMGTSSGQVRVWATYQTLLDQVPEVPEGWLVYVADREELYVRVRNGFRKVLDNEVAALQPHVVQLHEGNPYPRREPPPPTARSWRADDILAGPPRLTHAQPYPGAPHPGAYAHLRPATPTASPAHTHHDFQPSGGLRGIRGADFQCFQQARAAGLAGTFRAFLSSRLQDLYSIVRRADRAALPIVNLRDEVLSPSWEALFSGSEGQLKPGARIFSFDGRDVLQHPAWPQKSLWHGSDPSGRRLTESYCETWRTEARAATGQASSLLAGRLLEQKTAGCYNAFIVLCIENSFMTSSSK*