Sequence detailsbmy_19420 (Coding sequence)

Part of scaffold_2077 (SequenceType object (1))

For more information consult the page for scaffold_2077 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BT.106551ENSBTAG00000014496 (Cow)

Gene Details

C-C chemokine receptor type 6

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000036877, Cow)

Protein Percentage 91.35%
cDNA percentage 89.01%
Ka/Ks Ratio 0.05898 (Ka = 0.0397, Ks = 0.6733)

Additional orthologs identified in other species via the OPTIC pipeline.

CCR6 (Human)   Ccr6 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1788 bp    Location:130764..137889   Strand:+
Raw sequence 
>bmy_19420
ATGCTGGGTCATCACTTACCGCATTTTAACTGGGCTGCCATTCCCACCGTTGCCAACCCCACCTCCATATGGTATGAAGGCCTGACACCCCAGCACCCCGCAGCTGCGTCTCACCAGCACCCGTGTTGCCTCCCCAGGTCTGGACTCCGTCTGGGCTCGGTCCCTGCACAGCTCCCCAGCAGCGCGGTCTCCACGGCAGCCCTGTGTCCCCGCTTCCGTGGCATCCCCTCCTGCTCTGCTCCCAGCCCCCTTCCCACGCACCTGTACCCCACCCCTCCCTCAGTCTTGCCCGTTAGGACTCTACACTTGCAGGCAATTGCAAAAGTGCAGAGGGGAGCCCAGCCTCCCCGCAGTCCTGTGTCCAGAGCAGGGACCGGAGCAGCATCGAAGACTCAGTCTCCAGGCATCAGGGAAGGAGTGGGTTCAGGCCACCTGATCTGTGATTGGGAAGCAACAACGGGAGAATCAAATGATACCAGAAGTATGTTCAGAAAATCCTTCAGGGTGACCTCTGTGATCTACCGAATCCTTCCCCCCGATGTCAGTGTTGACTCTGGAGATTCACTTCTCTCCCGTTCTCTCCACTGTGAACCAGAGGACTTGAAAGTCCACTCCCCTTCTATTCCAGGCCCGGACTTTCTGCCCAGGTCAAGCACCACCATGAGAGTGGAACCCATGAATTCCACCAACATCTACGATGCAAATGAGGATTATTTTGGGTTGGCTAATAGTTCAGATTATTCACTCGATGTTGATAGCTTTCTATGTTCCTTGCAAGAGGTCAGAAAGTTCTCTGGGCTATTTGTGCCACTCGCTTACTCCTTGATATGTGTCTCTGGCCTCCTGGGCAATATTTTGGTGGTGGTCACCTTTGCTTTTTATAAGAAAGCCAAGTCTATGACAGACGTTTATCTCTTGAACATGGCCGTCGCAGACATACTCTTTGTCCTTACCCTCCCGTTCTGGGCAGTCAACCATGCTACTGGCGAGTGGATTTTCAGCAACGTCATGTGCAAACTGACCCGGGGCATCTACGCCATCAACTTTAACTGTGGGATGCTGCTCCTGACCTGTATCAGCCTGGACCGCTACATCGCCATCGTGCAGGCCACCAAGTCCTTCTGGCTCCGGTCCAGAACCTTGGCTCACCACAAAGTGATCTGTTTGGTCGTGTGGGTGGTGTCGATCCTCATCTCCAGCTCGACCTTCATGTTCAACCAGAAATACAAGCTCCAAGGCAGCGAGGTCTGCGAGCCCAGGTACCACACCGTCTCCGAGCCAATCCGCTGGAAGCTGCTGGTGCTGGGCCTTCAGCTCCTCTTCGGCTTCTTCATCCCGCTGGTGTTTATGATATTTTGCTACATGTTTATCGTCAAGACCTTAATTCAAGCTCAGAATTCTAAAAGGCACAGAGCCATCCGCGTGATCATAGCCGTGGTCCTTGTCTTCCTGGCTTGCCAGATCCCGCATAACATGGTGCTTCTTGTGACCGCCGTCAACCTGGGCAGGATGGACCGCTCATGCAGCAGCGAGAGGCTGCTGGGCTACACCAGGAACGTCACCGAGGTCCTGGCTTTCCTGCACTGCTGCCTCAACCCGGTGCTCTATGCCTTCGTCGGTCAGAAGTTTAGAAGCTACTTTCTGAAGATCATGAAGGACCTGTGGTGTGTGAGGAGGAGGCAGAAGTCGCTGGGCTTCTCCTGCTCCCGGCTGCACTCGGACAACTTCATCTCCCGGCAGAACAGCGAGACTGCGGACAATGACAACCCGTCCTCCTTCACCATGTGA

Related Sequences

bmy_19420T0 SequenceType object (3)

Length: 596 aa      View alignments
>bmy_19420T0
MLGHHLPHFNWAAIPTVANPTSIWYEGLTPQHPAAASHQHPCCLPRSGLRLGSVPAQLPSSAVSTAALCPRFRGIPSCSAPSPLPTHLYPTPPSVLPVRTLHLQAIAKVQRGAQPPRSPVSRAGTGAASKTQSPGIREGVGSGHLICDWEATTGESNDTRSMFRKSFRVTSVIYRILPPDVSVDSGDSLLSRSLHCEPEDLKVHSPSIPGPDFLPRSSTTMRVEPMNSTNIYDANEDYFGLANSSDYSLDVDSFLCSLQEVRKFSGLFVPLAYSLICVSGLLGNILVVVTFAFYKKAKSMTDVYLLNMAVADILFVLTLPFWAVNHATGEWIFSNVMCKLTRGIYAINFNCGMLLLTCISLDRYIAIVQATKSFWLRSRTLAHHKVICLVVWVVSILISSSTFMFNQKYKLQGSEVCEPRYHTVSEPIRWKLLVLGLQLLFGFFIPLVFMIFCYMFIVKTLIQAQNSKRHRAIRVIIAVVLVFLACQIPHNMVLLVTAVNLGRMDRSCSSERLLGYTRNVTEVLAFLHCCLNPVLYAFVGQKFRSYFLKIMKDLWCVRRRQKSLGFSCSRLHSDNFISRQNSETADNDNPSSFTM*