Part of scaffold_2056 (SequenceType object (1))

For more information consult the page for scaffold_2056 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SEC13ENSTTRG00000004395 (Bottlenosed dolphin)

Gene Details

SEC13 homolog (S. cerevisiae)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004137, Bottlenosed dolphin)

Protein Percentage 54.9%
cDNA percentage 62.88%
Ka/Ks Ratio 0.56752 (Ka = 0.2858, Ks = 0.5036)

SEC13ENSBTAG00000017825 (Cow)

Gene Details

Protein SEC13 homolog

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000023702, Cow)

Protein Percentage 79.05%
cDNA percentage 83.33%
Ka/Ks Ratio 0.17376 (Ka = 0.1133, Ks = 0.6519)

SEC13 (Minke Whale)

Gene Details

SEC13 homolog (S. cerevisiae)

External Links

Gene match (Identifier: BACU018889, Minke Whale)

Protein Percentage 59.51%
cDNA percentage 70.72%
Ka/Ks Ratio 0.78087 (Ka = 0.3665, Ks = 0.4694)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 846 bp    Location:362959..329697   Strand:-
>bmy_19436
ATGCCAGCATCCTCAAGATCCCTGAGGTCAGAGCAGCAACTGCTTTTACTCTTCCTGGTTCCAGGTGATACAGATGAATTGTGTGGCCCCATTAATACCAATGGGAACGAAACAAATTTACTCCGTCCTGATGGATTAAGTCTGTACTTCACTGGCTTGAGGAAGGTCCTGTTCTACCAGAAGTCAGAGAAAAGATCAGCAGCTCTTATAAATGGAGAGCTACCCCCCAAAGCCCCTATTCGCACGGAATTACAAAAGCAGCATGATGCCCAGGTGGACTACTGTGGCACCCGCCCGGCAACCCGCTCAGCAGACAGGTCCGTCAAGATCTGCGACGTGCTCAACGGAGGACAGACCCTCATCGCCGACCTCAGGGGTCATGAGGGTCCTGTGTGGCCAGTGGCCTGGGCCCACCCCACGTACGGCAATGTCCCGGCATCCTGCTCCTACGACCGGAAAGTCATTATCTGGAAAGAGGAAAATGGCACCTGGGAGAAGACGCATGAGCACACAGTAAACTCTGTGTGCTGGGCCCCCCGTGACTACGGCCTGATCCTAGCCTGTGGGAGCTGGGATGGGGCCATTTCTCTGCTGACTTACACCAGGTTGGGCCAGTGGGAAGTGAAGAAGACCAACCATGCTCACACTGTTGGCTGCAATGCCGTCAGCTGGGCCCCTGCTGTCGGACCTGGAAGCCTCACAGACCAGCCACCTGGGCAGAAGCCCAACTACACCAAGAAGTTTGCATTAGCTGGCTGTGACAACCTCATCAAACTGTGGGAGGAGGWGGAGGACGGCCAGCGGGAGGAAGGGCAGAAGTTGGACGCGCACAGCGAGTGGGTTTGA

Related Sequences

bmy_19436T0 SequenceType object (3)

Length: 282 aa      View alignments
>bmy_19436T0
MPASSRSLRSEQQLLLLFLVPGDTDELCGPINTNGNETNLLRPDGLSLYFTGLRKVLFYQKSEKRSAALINGELPPKAPIRTELQKQHDAQVDYCGTRPATRSADRSVKICDVLNGGQTLIADLRGHEGPVWPVAWAHPTYGNVPASCSYDRKVIIWKEENGTWEKTHEHTVNSVCWAPRDYGLILACGSWDGAISLLTYTRLGQWEVKKTNHAHTVGCNAVSWAPAVGPGSLTDQPPGQKPNYTKKFALAGCDNLIKLWEEXEDGQREEGQKLDAHSEWV*