Part of scaffold_2072 (Scaffold)

For more information consult the page for scaffold_2072 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NR4A1 ENSTTRG00000002817 (Bottlenosed dolphin)

Gene Details

nuclear receptor subfamily 4, group A, member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002640, Bottlenosed dolphin)

Protein Percentage 93.74%
cDNA percentage 93.34%
Ka/Ks Ratio 0.0999 (Ka = 0.0129, Ks = 0.129)

NR4A1 ENSBTAG00000000507 (Cow)

Gene Details

Nuclear receptor subfamily 4 group A member 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000648, Cow)

Protein Percentage 95.97%
cDNA percentage 93.57%
Ka/Ks Ratio 0.06319 (Ka = 0.0178, Ks = 0.2824)

NR4A1  (Minke Whale)

Gene Details

nuclear receptor subfamily 4, group A, member 1

External Links

Gene match (Identifier: BACU008044, Minke Whale)

Protein Percentage 98.83%
cDNA percentage 98.77%
Ka/Ks Ratio 0.13623 (Ka = 0.0052, Ks = 0.038)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1791 bp    Location:187616..204822   Strand:+
>bmy_19456
ATGCCCTGTATCCAAGCCCAGTATGGGACACCAGCACCAAGCCCAGGACCCCGTGACCACCTGACAAGCGACCCCCTGACCCCCGAGCTCAGCAAGCCCACCATGGACCTGGCCAGCCCTGAGGCGGCCCCCGCTGTCCCCACTGCCTTGCCCAGCTTCAGCACCTTCATGGACGGCTACACAGGGGAGTTTGACACCTTTCTCTACCAGCTGCCGGGAACAGCCCAGCCGTGCTCCTCGGCCTCCTCCTCGGCCTCCTCCACATCCTCATCGTCAGCCACCTCCCCTGCCTCTGCTTCATTCAAGTTTGAGGACTTCCAGGTGTACGGCTGCTACCCCGGCACCCTGAGCGGCCCTCTCGATGAGACCCTGTCCTCCAGCGGCTCTGACTACTATGGTAGTCCCTGCTCAGCCCCATCACCGTCCACGCCCAGCTTCCAGCCGCCCCAGCTCTCTCCCTGGGACGGCTCCTTTGGCCCCTTCTCGCCCAGCCAGACTTACGAAGGCATGCGGGCATGGACAGAGCAGCTGCCCAAGGCTTCTGGGCCCCCCCAGCCGCCGACCTTCTTTTCCTTTAGCCCTCCCACCGGCCCCAGTCCCAGCCTGGCCCAAAGCCCCCTGAAGCTGTTCCCCTCGCAAGCTGCCCACCAGCTGGGGGAGGGAGAGAGCTATTCCATGCCAACAGCGTTCCCAGGCCTGGTGCCCGCTTCTTCACACCTTGATGGCTTGGGGATGGTGGATGCGCCCGTGACCTCAGCCAAGGCCCGGAGTGGGGCTCCGGGTGGAAGCGAGGGCCGCTGTGCTGTGTGTGGGGACAACGCCTCTTGCCAGCATTATGGTGTCCGCACCTGCGAGGGCTGCAAGGGCTTCTTCAAGCGCACAGTGCAGAAAAATGCCAAGTACATCTGCCTGGCTAACAAGGACTGCCCTGTGGACAAGAGACGGCGAAACCGCTGCCAGTTCTGTCGCTTCCAGAAGTGCCTGGCTGTGGGCATGGTGAAGGAAGTTGTCCGGACAGACAGCCTGAAGGGGCGGCGGGGTCGGCTCCCTTCAAAGCCCAAGCAGCCCCCGGATGCCTCCCCTGTGAATCTCCTCACCTCCCTGGTCCGGGCACACCTGGACTCAGGGCCCAGCACTTCCAAACTGGACTACTCCAAGGAGCTGGTGCTGCCCCACTTCGGGAAGGAGGATGCCGGGGACGTGCAGCAGTTCTACAACCTGCTTTCGGGTTCCCTGGAGGTTATCCGCAAGTGGGCTGAGAAGATCCCCGGCTTTGCCGAGCTGTCCCCCGGGGACCAGGACTTGCTGCTGGAGTCGGCCTTCCTGGAGCTCTTCATCCTCCGCCTGGCCTACCGGTCTAAGCCGGCTGAGGGGAAGCTCATCTTCTGCTCAGGCCTGGTGCTGCACCGGCTGCAGTGTGCCCGCGGCTTCGGGGACTGGATCGACAGCATCTTGGCCTTCTCTCGCTCCCTGCACAGCTTGGTCGTCGATGTCCCTGCCTTTGCCTGCCTCTCTGCGCTCGTCCTCATCACAGACCGGCACGGGCTGCAGGAGCCTTGCAGGGTAGAGGAGCTGCAGAACCGCATTGCCAGCTGCCTGAAGGAGCACGTCTCGGCCGAGGCAGGCGAGCCTCAGCCGGCCAGCTGCCTGTCACGCCTGCTGGGCAAGCTGCCTGAGCTGCGGACCCTGTGCACCCAGGGCCTGCAGCGCATCTTCTACCTCAAGCTGGAGGACTTGGTGCCCCCTCCGCCCATCGTCGAGAAGATCTTTATGGACACGCTGCCCTTCTGA

Related Sequences

bmy_19456T0 Protein

Length: 597 aa      View alignments
>bmy_19456T0
MPCIQAQYGTPAPSPGPRDHLTSDPLTPELSKPTMDLASPEAAPAVPTALPSFSTFMDGYTGEFDTFLYQLPGTAQPCSSASSSASSTSSSSATSPASASFKFEDFQVYGCYPGTLSGPLDETLSSSGSDYYGSPCSAPSPSTPSFQPPQLSPWDGSFGPFSPSQTYEGMRAWTEQLPKASGPPQPPTFFSFSPPTGPSPSLAQSPLKLFPSQAAHQLGEGESYSMPTAFPGLVPASSHLDGLGMVDAPVTSAKARSGAPGGSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKQPPDASPVNLLTSLVRAHLDSGPSTSKLDYSKELVLPHFGKEDAGDVQQFYNLLSGSLEVIRKWAEKIPGFAELSPGDQDLLLESAFLELFILRLAYRSKPAEGKLIFCSGLVLHRLQCARGFGDWIDSILAFSRSLHSLVVDVPAFACLSALVLITDRHGLQEPCRVEELQNRIASCLKEHVSAEAGEPQPASCLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIVEKIFMDTLPF*