Sequence detailsbmy_19456 (Coding sequence)

Part of scaffold_2072 (SequenceType object (1))

For more information consult the page for scaffold_2072 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NR4A1ENSTTRG00000002817 (Bottlenosed dolphin)

Gene Details

nuclear receptor subfamily 4, group A, member 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002640, Bottlenosed dolphin)

Protein Percentage 93.74%
cDNA percentage 93.34%
Ka/Ks Ratio 0.0999 (Ka = 0.0129, Ks = 0.129)

NR4A1ENSBTAG00000000507 (Cow)

Gene Details

Nuclear receptor subfamily 4 group A member 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000000648, Cow)

Protein Percentage 95.97%
cDNA percentage 93.57%
Ka/Ks Ratio 0.06319 (Ka = 0.0178, Ks = 0.2824)

NR4A1 (Minke Whale)

Gene Details

nuclear receptor subfamily 4, group A, member 1

External Links

Gene match (Identifier: BACU008044, Minke Whale)

Protein Percentage 98.83%
cDNA percentage 98.77%
Ka/Ks Ratio 0.13623 (Ka = 0.0052, Ks = 0.038)

Additional orthologs identified in other species via the OPTIC pipeline.

NR4A1 (Human)   Nr4a1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1791 bp    Location:187616..204822   Strand:+
Raw sequence 
>bmy_19456
ATGCCCTGTATCCAAGCCCAGTATGGGACACCAGCACCAAGCCCAGGACCCCGTGACCACCTGACAAGCGACCCCCTGACCCCCGAGCTCAGCAAGCCCACCATGGACCTGGCCAGCCCTGAGGCGGCCCCCGCTGTCCCCACTGCCTTGCCCAGCTTCAGCACCTTCATGGACGGCTACACAGGGGAGTTTGACACCTTTCTCTACCAGCTGCCGGGAACAGCCCAGCCGTGCTCCTCGGCCTCCTCCTCGGCCTCCTCCACATCCTCATCGTCAGCCACCTCCCCTGCCTCTGCTTCATTCAAGTTTGAGGACTTCCAGGTGTACGGCTGCTACCCCGGCACCCTGAGCGGCCCTCTCGATGAGACCCTGTCCTCCAGCGGCTCTGACTACTATGGTAGTCCCTGCTCAGCCCCATCACCGTCCACGCCCAGCTTCCAGCCGCCCCAGCTCTCTCCCTGGGACGGCTCCTTTGGCCCCTTCTCGCCCAGCCAGACTTACGAAGGCATGCGGGCATGGACAGAGCAGCTGCCCAAGGCTTCTGGGCCCCCCCAGCCGCCGACCTTCTTTTCCTTTAGCCCTCCCACCGGCCCCAGTCCCAGCCTGGCCCAAAGCCCCCTGAAGCTGTTCCCCTCGCAAGCTGCCCACCAGCTGGGGGAGGGAGAGAGCTATTCCATGCCAACAGCGTTCCCAGGCCTGGTGCCCGCTTCTTCACACCTTGATGGCTTGGGGATGGTGGATGCGCCCGTGACCTCAGCCAAGGCCCGGAGTGGGGCTCCGGGTGGAAGCGAGGGCCGCTGTGCTGTGTGTGGGGACAACGCCTCTTGCCAGCATTATGGTGTCCGCACCTGCGAGGGCTGCAAGGGCTTCTTCAAGCGCACAGTGCAGAAAAATGCCAAGTACATCTGCCTGGCTAACAAGGACTGCCCTGTGGACAAGAGACGGCGAAACCGCTGCCAGTTCTGTCGCTTCCAGAAGTGCCTGGCTGTGGGCATGGTGAAGGAAGTTGTCCGGACAGACAGCCTGAAGGGGCGGCGGGGTCGGCTCCCTTCAAAGCCCAAGCAGCCCCCGGATGCCTCCCCTGTGAATCTCCTCACCTCCCTGGTCCGGGCACACCTGGACTCAGGGCCCAGCACTTCCAAACTGGACTACTCCAAGGAGCTGGTGCTGCCCCACTTCGGGAAGGAGGATGCCGGGGACGTGCAGCAGTTCTACAACCTGCTTTCGGGTTCCCTGGAGGTTATCCGCAAGTGGGCTGAGAAGATCCCCGGCTTTGCCGAGCTGTCCCCCGGGGACCAGGACTTGCTGCTGGAGTCGGCCTTCCTGGAGCTCTTCATCCTCCGCCTGGCCTACCGGTCTAAGCCGGCTGAGGGGAAGCTCATCTTCTGCTCAGGCCTGGTGCTGCACCGGCTGCAGTGTGCCCGCGGCTTCGGGGACTGGATCGACAGCATCTTGGCCTTCTCTCGCTCCCTGCACAGCTTGGTCGTCGATGTCCCTGCCTTTGCCTGCCTCTCTGCGCTCGTCCTCATCACAGACCGGCACGGGCTGCAGGAGCCTTGCAGGGTAGAGGAGCTGCAGAACCGCATTGCCAGCTGCCTGAAGGAGCACGTCTCGGCCGAGGCAGGCGAGCCTCAGCCGGCCAGCTGCCTGTCACGCCTGCTGGGCAAGCTGCCTGAGCTGCGGACCCTGTGCACCCAGGGCCTGCAGCGCATCTTCTACCTCAAGCTGGAGGACTTGGTGCCCCCTCCGCCCATCGTCGAGAAGATCTTTATGGACACGCTGCCCTTCTGA

Related Sequences

bmy_19456T0 SequenceType object (3)

Length: 597 aa      View alignments
>bmy_19456T0
MPCIQAQYGTPAPSPGPRDHLTSDPLTPELSKPTMDLASPEAAPAVPTALPSFSTFMDGYTGEFDTFLYQLPGTAQPCSSASSSASSTSSSSATSPASASFKFEDFQVYGCYPGTLSGPLDETLSSSGSDYYGSPCSAPSPSTPSFQPPQLSPWDGSFGPFSPSQTYEGMRAWTEQLPKASGPPQPPTFFSFSPPTGPSPSLAQSPLKLFPSQAAHQLGEGESYSMPTAFPGLVPASSHLDGLGMVDAPVTSAKARSGAPGGSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKQPPDASPVNLLTSLVRAHLDSGPSTSKLDYSKELVLPHFGKEDAGDVQQFYNLLSGSLEVIRKWAEKIPGFAELSPGDQDLLLESAFLELFILRLAYRSKPAEGKLIFCSGLVLHRLQCARGFGDWIDSILAFSRSLHSLVVDVPAFACLSALVLITDRHGLQEPCRVEELQNRIASCLKEHVSAEAGEPQPASCLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIVEKIFMDTLPF*