Part of scaffold_2083 (Scaffold)

For more information consult the page for scaffold_2083 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VCAN ENSTTRG00000006219 (Bottlenosed dolphin)

Gene Details

versican

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005871, Bottlenosed dolphin)

Protein Percentage 91.78%
cDNA percentage 93.91%
Ka/Ks Ratio 0.47867 (Ka = 0.0262, Ks = 0.0547)

VCAN ENSBTAG00000014906 (Cow)

Gene Details

versican core protein precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019848, Cow)

Protein Percentage 83.21%
cDNA percentage 89.44%
Ka/Ks Ratio 0.47555 (Ka = 0.0927, Ks = 0.195)

VCAN  (Minke Whale)

Gene Details

versican

External Links

Gene match (Identifier: BACU015437, Minke Whale)

Protein Percentage 96.95%
cDNA percentage 98.35%
Ka/Ks Ratio 0.67065 (Ka = 0.0151, Ks = 0.0225)

Genome Location

Sequence Coding sequence

Length: 5709 bp    Location:48889..66496   Strand:+
>bmy_19473
ATGAGTGATTTGAGTGTAATTGGTCATCCAATAGATTCAGAATCTAAAGAAGATGAGCCTTGTAGTGAAGAAACAGATCCAGAGCATGATCTAATTGCTGAAATTTTACCTGAGCTAATTGAAATTGATCTATACCACAGTGAAGAGGATGAAGGGGAAGACGAGGAGTGTGCCAATGCCACTGACGTCACGACCACCCCATCTGTGCAGTACATAAATGGAAAGCATCTGGTTACCACTGTGCCCAAGGACCCAGAAGCAGCAGAAGCTAGGCGTGGCCAGTTCGAAAGTGTTGCACCTTCTCAAAATTTTTCAGACAGCAGTGAAAGTGATAGTCATCAGTTTGTGATCACCAAAACTGGAATGCCTACTGCCATGCAACCTAATGAGTCTAAAGAAACAACTGAATCCCTTGAAATTACATGGAGACCTGAGATTTACCCTGAAGCACCAGAGCATTTTTCAAGTGGCGAGCCTGATATTTTCCCCACAGCCCCAGGCCGTGAGGGAGAAGCCACGGAAGGGCCAGAATCAATCACAGAGAAAAGTCCTGACCTTGATAATCTGGTACATGAACATACTGAATCGGTACCTCTGTTTCCTGAAGAGTCTTCAGGAGATGCTGCCATTGACCAAGAATCTCAAAAAATGGTCTTTTCAAGGGCTACAGAAGGAACATTTGGTGAAGAGGCAGAAAAAAGCACTTCTACCACATATACTCCAAGTATAGTTGCAAGTTCTGTATCAGCGCATGTTTCAGAGGATGTATCATTTACCTTAACAGGGACTCCACGGCCTGATGAGCCGTTGTCCACAATAGAAAGCTGGGTGGAAATAACCCCTAGACAAATTGTAGAGTTCTCAGGAAGTCCTTCAATTCCGATTCCAGAAGGCTCTGGGGAAGCAGAAGAAGATAAAGATCAAATGTTTGCCATGGTAACTGATTTATCACAGAAAAATACTACAGATTCTCTCGTTACTTTAGACACTAGCAAGATAATGATCACAGAGAGCCTTTTGGATGTTCCTGCAACCACCATATATTCGGTTTCTGAACAATCTTCTGCAGTAGTGCCTACCAAATTTGCAAGGGAGACAGACACTTCTGAGTGGCCTTTCAGTACATCTCTTGAGGGAAAGACAAGGAAAGATGAGGAGAAGGGAACTACAGGTACGGCTTCTACAGCTGAGGTACATGCGCCCACACAGAGATCAGATCAATTAACTTTACCCTCTGAATTAGAAAGCTCAAATGAAGCTACATCCAGTGATTCAGTATCTGCTACCAGGAAGAGTTTTATGTCCTGGATGACACCCACACAGTCTGAAACGGAAACAGCAAATTCTACTCTTGTCTTTACAGAAACTAATGTTTTAGACCATCTGGGGGCACAGACTGCTGAGCCCAGCCTTAGCAGTCAACCTGGGGTCGGGGAAGTGCCGCCCACTGTCCCAGGTAGCCCCGTCTCTGTCTTTATGGAGCAGGGTTCTGGAGAAGCTGCTGCTGACCCAGAAACCACCACTGTTTCTTCATTTGCATTAAATTTAGAGCCTGAAATTCAAGCCAGAAAGGAAGCATCTGGCACTTTGTCTCCACACGTGGAAATTGTATTCCCTTTTGAGCCAACTGGACTAGTTTTGAGTACTGTAATGGACAGAGAGGTTGCTGAAATTAAAAGCCAAACATCCAAGGAAAACATGATTTCAGAGATCTCAGGAGAGCCAACTCCTGGGGCAGAAATAAAAGGCTTTTCTACAGATTTTCCTTTGGAGGAAGATTTCAGTGGTGACTTCAGAGAATACTCAACAGTATCTCATCCCATAACAAAAGAAGAAACGGTAATGATGGAAGGCTCTGGGGATGCAGCATTTAAGGATACCCAGATGTCACCATCTGTAATACCTACTTCAGACCACAGTAATCACACAGCTGACTCAGAAGAGCCTAGTAGCACCTTGGTCAGCACTTCAGCCTTCCCTTGGGAAGAGTTCACAGCCTCAGCTGAGGGCTCAGGTGAGCAACTGGTCTCAGTAAGCAGCTCTGTTGACCAAGTGTTTCCCAGGGGTGTGGGAAAAGTCTCTGGGACAGATTCCCCATTTATTGACCAAAGATTGGGTGAAGAAGGTGCTATCAATGAAACCGATAAAAGATCCACCATCTTGCCAACAGCAGAAGCTGAAAGTACTAAAGCTTCAAAGGAAAAGGAGGAAGTGAAGGTCAATGGCACAGTTTCAATGGACTTTCCTCCAACTATGGAGCCGGACAAATTATGGCCCAGGAAAGAAGTCAGCCCTGTAAGGCAAGGAATTGAAAGTGAAATAGTGTCAGAGGAAAAGATTCAAGAACAGAAATCTTCTGAACCCCCTCAAAGCTCTGTTGCACCAGAACAAACAACTTTCGATTCCCAAACATTTCCTGAAACTGGACTCCGAACCACAGATTATTCTACACTAACAACAAAGAAAACTTACAGTAACAATAAGAACATGGAGGGGGAAGGCATTTCCTCAGTTGACGTGTCTACTCCAAACCTAGATTCAGAGGGCTTAGAGTCGTATACTACTCTCCCTGAAGTTACTGAAAAATCCCATATTTTCTTAGCTACTGCTTCAGTGACTGAATCAATACCAGCTGAAAGTGTAATTACAGGTTCAACAATCAAAGAGAAAGAAAGTATAAAATCCTTTCCCAAAGTTATGAGACCAACAATTGAAGAGTCAGATACGGATCTTTTATTCTCTGGACTGGGATCAGGAGAAGTTCCGCCCACTACAGGATCCGTGAACTTTACTAAAATAGAACAAGTCATTAGCACATTATATCCCCAGACTTCTCAAGTGCAAAGTTTAGAAACCAGCATCTTAAATGACACAACTGGAGACGATGAGGGAATGGGAAATGTGGCAAATGAAATCAGACCACTCATTTCCAAAATAGACAGCATTTTCGAAGCCAGTGAGACAGCATCCAGCACAGCCTTACTAGAAATTTTAAGTGACACCACAACAGAAGGACCCTTCACGGCAACTCTCACTTTCTCTACAGACACGGAACATCCTCAAAATCAGACACACAGTTGGGCAGAAGAAATCCAGACTAGGAGACCACAGACTATGACTGATCAAGTCTCTAACGAGAACACTTCAACAGCAGAAGCTAAAGAAACAGCAACCCCTTCCACTGATTTTCTGACTAGAACTTATGGTCCTGAAACGGCCAAAGGATTTGTTACATCAACACCAAAACCATCTGACTGGTTTTATGAACATTCTGGAGAAGGATCTGGGGAATTGGATGTGGTTGATTTAGTCCACACTTCTGGAACTACTCAGGCAACTAGGCAAGGCAGCACCACATTTGTTCCTGATAGATCCCTGGAAAAACATTCTGAGGCTCCAAGAGCTGAAGCTGTTACTCTTGATGGATTCCCAACAGTTTCAGTGGTGCTGCCTCTTCATTCAGAGCAGAATGAAAGCTCCCCTGGTCCAACTAGCACACTGTCAAGTACAGTGTCATATGAAACGTCCACAGGAGGTGCTGCAGACAGTTTCCAAGACCACTTTGGGGGATTCGAGGATTCCACATTGAAACCTGACAGAAGAAAAGCCACTGAAAATATTATTATAGATCTGGACAAGGAGGACAAGGATTTAATATTGACAATTACAGAGAGTACCATCCTTGAAATTCTACCTGAGCTGACATCAGATAAAAATACTATCATAGATATTGATCACACTAAACCTATATATGAAGACATCCTTGGAATGCAAACGGACTTAGATACAGAGGTACCCTCAGGACCACCTGGCAGCAATGAAGACAGCACTCAAGTTCTAGAGAAGTATGAGGCAGCTGTTAACCTCTCTTCAACCGAGGAAAACTTTGAGGCCTCTGGTGATACTCTTCTGGCTAATTACACTCAGGCAACACATAACGAATCGATGCCTCCTGAAAACAGAAGTCAGTTAGATCACATGGACTTTATCTTCACACCTGGGATACCCATCCCTAGCCCAGAAACAGAATTAGATGTTTTACTTCCCACAGCAATATCCCTGCCCATTCCTAGTAAGTCTGCCACAGTTAATCCAGAGATTGAAGAACCAAAAATTGAAGCAAAAACCCTGGATGACATCTTTGAATCAAGCACTTTGTCTGACGGTCAAGCTATTGCAGACCAAAGTGAAATAATATCAACATTGGGCCATTTGGAAAGGACACAGAATGAGGATGAAGAAAAGAAACATGTAGGTCCCTCTCTTCAACCAGAATTCTCTTCCGGGGCTGAGGAGGCACTGATAGGTCCTACCCCCTACATAAGTATTGGTACTACCTACCTTACGGCTCAGAGTTTAACAGAGGCACCTGATGTGATGGAAGGATCCAATCCCCCAGCTTCCACGGATACATCAGCAGTTTTAGCTGTTGCAAAGATGTTCTCTCAGACACCATCATCTCCTCCACTCAGTGTCCACTTAGGCAGCGGGGCCTCTGAGCACTCAGAGGACCCCCAGCCAAGAGCTCTGCCAAGTACAGATGCCAGCACGTCCCCAATACCCCCAGGAAAACTTGCAAATATTGAAGTGACTTTCAAACCCTCAAGTGAAGAGGACTTTCACATAACTGAGCCTCCATCCATATCTCCTGACACAGAGCCTTCAGAAGATGAAAGTAAACCTAAATTATTAGAACAAATGGAGGCTTCTGCCACAGAACTAATTGCTCAAGAAGAAACTGAGATTTTCCAAGACTCTCAAAACAAAACCAGTGTTCAACTTTCTGGAGACACAGTCAAGGTATTTCCCGGTATTGAAACACCTGAGGCTGGGACTGTTGTCACAGCTGCAAGTGAAATGGAGTTAGAAGGTGCTACACTGTGGCCACATTCTACTTCTGCTTCTGTGATTTATGGGTTCGAGGCAGGTGTGGTGCCTCAGGCCAGCCCACAGACTTCTGAGAGGCCCACCGTCCCTTCTCCTCTGGAAATAAACCCTGAAACACAAGCAGCTTTGATCAGAGGGGAGGATTCCACAGTAGCAGCACCAGAACAGCAAGTATCGGTGAGGATTCTTGATTCTAATAATCAGGCAACACTAAGCACCGCAGAGTTAAATACTGAGCTTGCAACACCATCATTTTCCCTTCTGGAAACTTCTAATGAAACCAGTTTCCTGATTGGCATTAATGAAGAGTCAGTGGAAGGCACAGCAATCTATTTACCAGGACCTGATCGTTGCAAAACGAACCCGTGCCTTAACGGGGGCACCTGTTATCCTACTGAAACTTCCTATGTGTGCACCTGTGTGCCAGGATACAGTGGAGACCAGTGTGAACTTGATTTTGATGAATGTCACTCTAATCCTTGTCGCAATGGAGCCACGTGTGTCGATGGGTTTAATACCTTCAGGTGTCTCTGCCTGCCAAGCTATGTTGGTGCACTTTGCGAGCAAGACACGGAGACATGTGACTATGGCTGGCACAAATTTCAAGGGCAGTGCTACAAGTACTTTGCCCATCGACGTACTTGGGATGCAGCTGAACGGGAATGCCGTCTGCAGGGCGCCCATCTCACAAGCATTCTGTCTCATGAAGAACAAATGTTTGTGAATCGTGTGGGCCATGATTATCAGTGGATAGGCCTCAATGACAAGATGTTTGAACATGACTTTCGTTGGACCGATGGCAGCACACTGGTAAGTTACTGA

Related Sequences

bmy_19473T0 Protein

Length: 1903 aa      View alignments
>bmy_19473T0
MSDLSVIGHPIDSESKEDEPCSEETDPEHDLIAEILPELIEIDLYHSEEDEGEDEECANATDVTTTPSVQYINGKHLVTTVPKDPEAAEARRGQFESVAPSQNFSDSSESDSHQFVITKTGMPTAMQPNESKETTESLEITWRPEIYPEAPEHFSSGEPDIFPTAPGREGEATEGPESITEKSPDLDNLVHEHTESVPLFPEESSGDAAIDQESQKMVFSRATEGTFGEEAEKSTSTTYTPSIVASSVSAHVSEDVSFTLTGTPRPDEPLSTIESWVEITPRQIVEFSGSPSIPIPEGSGEAEEDKDQMFAMVTDLSQKNTTDSLVTLDTSKIMITESLLDVPATTIYSVSEQSSAVVPTKFARETDTSEWPFSTSLEGKTRKDEEKGTTGTASTAEVHAPTQRSDQLTLPSELESSNEATSSDSVSATRKSFMSWMTPTQSETETANSTLVFTETNVLDHLGAQTAEPSLSSQPGVGEVPPTVPGSPVSVFMEQGSGEAAADPETTTVSSFALNLEPEIQARKEASGTLSPHVEIVFPFEPTGLVLSTVMDREVAEIKSQTSKENMISEISGEPTPGAEIKGFSTDFPLEEDFSGDFREYSTVSHPITKEETVMMEGSGDAAFKDTQMSPSVIPTSDHSNHTADSEEPSSTLVSTSAFPWEEFTASAEGSGEQLVSVSSSVDQVFPRGVGKVSGTDSPFIDQRLGEEGAINETDKRSTILPTAEAESTKASKEKEEVKVNGTVSMDFPPTMEPDKLWPRKEVSPVRQGIESEIVSEEKIQEQKSSEPPQSSVAPEQTTFDSQTFPETGLRTTDYSTLTTKKTYSNNKNMEGEGISSVDVSTPNLDSEGLESYTTLPEVTEKSHIFLATASVTESIPAESVITGSTIKEKESIKSFPKVMRPTIEESDTDLLFSGLGSGEVPPTTGSVNFTKIEQVISTLYPQTSQVQSLETSILNDTTGDDEGMGNVANEIRPLISKIDSIFEASETASSTALLEILSDTTTEGPFTATLTFSTDTEHPQNQTHSWAEEIQTRRPQTMTDQVSNENTSTAEAKETATPSTDFLTRTYGPETAKGFVTSTPKPSDWFYEHSGEGSGELDVVDLVHTSGTTQATRQGSTTFVPDRSLEKHSEAPRAEAVTLDGFPTVSVVLPLHSEQNESSPGPTSTLSSTVSYETSTGGAADSFQDHFGGFEDSTLKPDRRKATENIIIDLDKEDKDLILTITESTILEILPELTSDKNTIIDIDHTKPIYEDILGMQTDLDTEVPSGPPGSNEDSTQVLEKYEAAVNLSSTEENFEASGDTLLANYTQATHNESMPPENRSQLDHMDFIFTPGIPIPSPETELDVLLPTAISLPIPSKSATVNPEIEEPKIEAKTLDDIFESSTLSDGQAIADQSEIISTLGHLERTQNEDEEKKHVGPSLQPEFSSGAEEALIGPTPYISIGTTYLTAQSLTEAPDVMEGSNPPASTDTSAVLAVAKMFSQTPSSPPLSVHLGSGASEHSEDPQPRALPSTDASTSPIPPGKLANIEVTFKPSSEEDFHITEPPSISPDTEPSEDESKPKLLEQMEASATELIAQEETEIFQDSQNKTSVQLSGDTVKVFPGIETPEAGTVVTAASEMELEGATLWPHSTSASVIYGFEAGVVPQASPQTSERPTVPSPLEINPETQAALIRGEDSTVAAPEQQVSVRILDSNNQATLSTAELNTELATPSFSLLETSNETSFLIGINEESVEGTAIYLPGPDRCKTNPCLNGGTCYPTETSYVCTCVPGYSGDQCELDFDECHSNPCRNGATCVDGFNTFRCLCLPSYVGALCEQDTETCDYGWHKFQGQCYKYFAHRRTWDAAERECRLQGAHLTSILSHEEQMFVNRVGHDYQWIGLNDKMFEHDFRWTDGSTLVSY*