Part of scaffold_2114 (Scaffold)

For more information consult the page for scaffold_2114 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHSY3 ENSTTRG00000004858 (Bottlenosed dolphin)

Gene Details

chondroitin sulfate synthase 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004583, Bottlenosed dolphin)

Protein Percentage 98.86%
cDNA percentage 98.93%
Ka/Ks Ratio 0.25204 (Ka = 0.0057, Ks = 0.0225)

CHSY3 ENSBTAG00000014661 (Cow)

Gene Details

chondroitin sulfate synthase 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000041677, Cow)

Protein Percentage 97.5%
cDNA percentage 95.83%
Ka/Ks Ratio 0.09257 (Ka = 0.012, Ks = 0.1301)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1563 bp    Location:141478..143040   Strand:+
>bmy_19497
ATGCAGCAGCTGTTCCATGAAAATTATGAACACAATCGGAAGGGTTATATCCAAGACCTTCACAACAGCAAAATCCATGCAGCCATAACACTTCATCCAAACAAAAGGCCTGCCTACCAATACAGGCTTCATAATTACATGCTTAGCCGCAAAATTTCTGAACTTCGCTACCGCACCATCCAGCTCCACCGGGAGAGCGCTCTGATGAGCAAGCTCAGTAACAGCGAAGTGAGCAAAGAGGACCAGCAGCTGGGAGTGATGCCTTCTTTCAACCACTTCCAGCCTCGGGAGAGAGATGAAGTGATAGAATGGGAGTTCCTGACAGGGAAGCTCCTTTACTCAGCATCTGAGAACCAGCCTCCCCGACAGAGCATCAGCAGCATCCTGAGAACAGCGCTGGATGACACCGTCCTACAGGTGATGGAGATGATCAATGAGAATGCCAAGAGTAGAGGACGGCTCATTGACTTCAAGGAAATTCAGTATGGCTACCGCAGGGTTGATCCCCTGCATGGGGTGGAGTACATTTTGGATTTACTCCTCTTATACAAAAGACACAAGGGGAGGAAACTGACTGTGCCGGTAAGACGTCATGCCTATCTTCAGCAGTTGTTCAGCAAGCCTTTCTTCAGAGAAACTGAAGAGCTAGATGTCAACAGTCTTGTAGAGAGTATTAACAGTGACACTCAGTCATTCTCTTTTATATCTAATTCTTTAAAGATATTATCTTCTTTTCAAGGTGCCAAAGAAATGGGAGGGCACAATGAAAAGAAAATACATGTTCTTGTCCCTCTCATTGGAAGGTATGACATTTTCTTGAGATTCATGGAGAACTTTGAAAACACTTGTCTTATCCCAAAGCAGAATGTAAAGCTGATCATCATCCTTTTCAGTAGGGATTCTGGCCAAGATTCCAGCAAGCATATTGAGCTGATACAAGAGTATCAAAACAAGTACCCTAAAGCAGAAATGACCCTGATCCCCATGAAGGGAGAGTTTTCCAGAGGTCTTGGTCTTGAAATGGGATCTTCCCAGTTTGACAATGATACTTTGCTGCTATTTTGTGATGTTGACTTGATCTTCAGAGGAGACTTTCTCCAACGATGTAGAGACAATACAATTCAGGGACAACAGGTGTACTATCCCATCATCTTTAGCCAGTATGACCCAAAGGTAACCAATGGGGGAAGTCCTCCCACTGATAATGACTTTGTCTTCTCAAAGAAGACTGGATTTTGGAGAGACTATGGATATGGAATTACCTGTATTTATAAAAGTGATCTTCTGGGTGCAGGTGGATTTGATACCTCAATACAAGGCTGGGGACTGGAAGATGTAGATCTCTACAATAAAGTTATTCGATCTGGCTTAAGGCCCTTCAGAAGTCAAGAAGTAGGAGTAGTGCATATTTTCCATCCAGTTCATTGTGACCCTAACTTGGACCCTAAGCAGTATAAGATGTGCTTAGGATCCAAGGCAAGTACTTTTGCCTCAACTGTGCAACTGGCTGAACTGTGGTTGGAAAAACATTTGGGTGTCAGGTACAATCGAACTCTCTCCTGA

Related Sequences

bmy_19497T0 Protein

Length: 521 aa      View alignments
>bmy_19497T0
MQQLFHENYEHNRKGYIQDLHNSKIHAAITLHPNKRPAYQYRLHNYMLSRKISELRYRTIQLHRESALMSKLSNSEVSKEDQQLGVMPSFNHFQPRERDEVIEWEFLTGKLLYSASENQPPRQSISSILRTALDDTVLQVMEMINENAKSRGRLIDFKEIQYGYRRVDPLHGVEYILDLLLLYKRHKGRKLTVPVRRHAYLQQLFSKPFFRETEELDVNSLVESINSDTQSFSFISNSLKILSSFQGAKEMGGHNEKKIHVLVPLIGRYDIFLRFMENFENTCLIPKQNVKLIIILFSRDSGQDSSKHIELIQEYQNKYPKAEMTLIPMKGEFSRGLGLEMGSSQFDNDTLLLFCDVDLIFRGDFLQRCRDNTIQGQQVYYPIIFSQYDPKVTNGGSPPTDNDFVFSKKTGFWRDYGYGITCIYKSDLLGAGGFDTSIQGWGLEDVDLYNKVIRSGLRPFRSQEVGVVHIFHPVHCDPNLDPKQYKMCLGSKASTFASTVQLAELWLEKHLGVRYNRTLS*