Part of scaffold_2166 (Scaffold)

For more information consult the page for scaffold_2166 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HIP1 ENSTTRG00000001050 (Bottlenosed dolphin)

Gene Details

huntingtin interacting protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000988, Bottlenosed dolphin)

Protein Percentage 87.39%
cDNA percentage 88.9%
Ka/Ks Ratio 0.45012 (Ka = 0.0557, Ks = 0.1237)

HIP1 ENSBTAG00000000781 (Cow)

Gene Details

huntingtin-interacting protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001039, Cow)

Protein Percentage 84.09%
cDNA percentage 85.41%
Ka/Ks Ratio 0.25355 (Ka = 0.1079, Ks = 0.4257)

HIP1  (Minke Whale)

Gene Details

huntingtin interacting protein 1

External Links

Gene match (Identifier: BACU012032, Minke Whale)

Protein Percentage 85.87%
cDNA percentage 88.69%
Ka/Ks Ratio 0.45744 (Ka = 0.1026, Ks = 0.2242)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2898 bp    Location:236582..287082   Strand:+
>bmy_19533
CCCTCCCCCCTCCCTCTTGTTTTTCAGACTGTCAGCATCAATAAGGCCATTAATACGCAGGAAGTGGCTGTAAAGGAAAAACACGCCAGAACGTGCATACTGGGCACCCACCATGAAAAGGGGGCACAGACCTTTTGGTCTGTTGTCAACCGGCTGCCCCTCTCCAGCAACGCYGTGCTCTGCTGGAAGTTCTGCCACGTGTTCCACAAACTCCTCCGGGATGGACACCCAAACGTCCTGAAGGACTCTCTGAGATACAAAAACGAATTGAGTGACATGAGCAGGATGTGGGTGAGTTTGGACACGCACCCAGGGGCCACCTGTGCCACCTTATCCTTTCCCAGAGGCCTCAGAACAAGGACTGTGGAATGGAACAAAAATCCKAGGTTCCCAGGCAACCTTCAGATGAGTGACCGGCAGCTGGACGAGGCCGGAGAGAGTGATGTTAACAACTTTTTCCAGCTGACAGTGGAAATGTTCGACTACCTGGAGTGTGAACTTAACCTCTTCCAAACTGTGTTCAACTCCCTGGACATGTCCCGTTCCGTGTCAGTGACGACAGCTGGGCAGTGCCGCCTCGCCCCGCTGATCCAGGTCATCTTGGACTGCAGCCACCTCTATGATTACACTGTCAAACTTCTCTTCAAACTCCACTCCTGTCTTCCAGCCGACACCCTGCAAGGCCACCGGGACCGCTTCATGGAGCAGTTCACAAAGTTGAAAGATCTCTTCTACCGCTCCAGCAACCTTCAGTACTTCAAGCGGCTCATTCAGATCCCTCAGCTGCCAGACAACCCACCCAACTTCCTACGAGCCTCCGCCCTGTCAGAGCACATCAGCCCCGTGGTGGTGATCCCAGCCGAGGCCTCGTCCCCCGACAGCGAGCCAGTCTTAGAGAAGGATGACCTCATGGACATGGATGCCTCCCAGCAGAATTCATACGACAGCAAGTTCGATGACATCTTTGGCAGCTCCTCCAGCAGCGATCCCTTCAATTTCAACAGTCAGAACGGCGTGAACAAGGACGAGAAGGATCACTTAATTGATCAACTGTACGGAGAGATCAGTGGGCTGAAAGCACAGCTGGAAAACATGAAGACTGAGAGCCATCGCGCCATGCTGCAGCTGAAGGGCCGCATCAGCGAGCTGGAGGCCGAGCTGGCCGAGCAGCAGCACCTGCGGCAGCAGGCGGCCGACGAGAGCGAGTTCCTCCGGGCCGAGCTGGACGAGCTCAAGAAGAAGCGAGAGGACACGGAGAAGGCTCAGCGGAGCCTGACGGAGATCGAGAGAGGGACGATCTTCTGGGGGTTCTGGCTTATTGGAAGGAGGACAGAGGGTCCCCGCCAGTGTAGACCCCTCACCTTGGTCCATGACAATACAGGGAAAGCCCAAGCCAACGAGCAGCGCTACAGCAAGCTAAAGGAGAAGTACAGCGAGCTGGTGCAGAACCACGCCGACCTGCTGCGGAAGAATGCAGAGGTGACCAAACAGGTGTCCGTGGCCAGACAAGCCCAAGTGGATTTGGAACGAGAGAAAAAAGAGCTAGAGGATTCTTTCCAGCGCATAAGCGACCAGGCCCAGCGGAAGGGGCAGATTCCTTGTGGCCTGGTGGTGGGTTTGGACCTCTGGAAAGGGGACAGTTTAATTCTCCCAGCAACTCCCTCTTCCCACTCGGTCGCCCTGCAGTCAGAAGCAAAATGGACCGCCCAGATCGCCGAGCTGAAGAAGGAGCGGGGCAGCCTGGTGGATGCCGTGGCTTGTCGAGAGGAGGAACTGTCCACTCTTCGGGAACAGTTGGAATACACCCAGATCAAACTGTCCAGCACACAGGCAAGTAACAGACGCCCACTGGGGCTGACCAAGTCCAATTTCATACCCATGGGCCTCGGCAGTATCACCTACTCTCCAAGGTCAGGTCCGTTTCCAGCTGCATCGAGCAACTGGAAAAATGCTGGAGCCAATATCAGTGGGCTTCTCCACTCGGTAACCCTCCTGGCCCACTTGACCAGTGACACCATTGTTCATGGCAGCACCACCTGCCTTAGAGCCCCGCCAGAGCCTGCCGACTGTAAGTACCAGGGTGAGGGGCCACCACCACAGCACGGGGAGCAGGGGGCCTTTAAAAGTCTCTGTCGCCTTGCCTCTGCAGCTCTGACCGAGGCCTGTAAGCAGTATGGCAGGGAGACCCTCACCTATCTGTCTTTCCTGGAGGAAGAAGGAATCGTCGAGAATGCCGACAGCACAGCCATGAGAAGCTGCCTCGCCAGGATCACAGCCATTGGCGAGGAGCTCCTGCCCAGAGGCCTGGACATCAAACAGGAGGAACTGGGGGACCTGGTGGACAAAGAGATGGCTGCCACTTCCGCTGCCATTGAAACTGCTACGGCCAGAATAGAGGAGATGCTCAGCAAATCCCGAGCTGGAGACACAGGAGTTAAATTGGAGGTGAATGAAAGGATCCTTGGCTCCTGTACCAGCCTAATGCAGGCTATTCAGGTCCTAATCGTGGCCTCAAAGGAGCTCCAGAGAGAGATAGTGGAGAGTGGCCGGGTGAAAGCGGATAAGGACAGCCCAAACCTGACCCAGCTGCAGCAGGCCTCTCGGGGCGTGAACCAGGCCACCGCCGCAGTTGTGGCCTCAACCACTTCTGGCAAATCACAGATCGAGGACACAGACAGCATGGACTTCTCAAGCATGACGCTGACCCAGATCAAACGCCAGGAGATGGATTCCCAGGTTAGGGTGCTGGAGCTAGAAAACGAACTGCAAAAGGAGCGTCAAAAACTGGGAGAGCTTCGGAAAAAGCATTACGAGCTCGCTGGTGTCGCCGAGGGCTGGGAGGAAGGAACAGAAGCATCACCACCTACGCTGCAAGAAGCGATCACCGAAAAAGAATAG

Related Sequences

bmy_19533T0 Protein

Length: 966 aa      View alignments
>bmy_19533T0
PSPLPLVFQTVSINKAINTQEVAVKEKHARTCILGTHHEKGAQTFWSVVNRLPLSSNAVLCWKFCHVFHKLLRDGHPNVLKDSLRYKNELSDMSRMWVSLDTHPGATCATLSFPRGLRTRTVEWNKNPRFPGNLQMSDRQLDEAGESDVNNFFQLTVEMFDYLECELNLFQTVFNSLDMSRSVSVTTAGQCRLAPLIQVILDCSHLYDYTVKLLFKLHSCLPADTLQGHRDRFMEQFTKLKDLFYRSSNLQYFKRLIQIPQLPDNPPNFLRASALSEHISPVVVIPAEASSPDSEPVLEKDDLMDMDASQQNSYDSKFDDIFGSSSSSDPFNFNSQNGVNKDEKDHLIDQLYGEISGLKAQLENMKTESHRAMLQLKGRISELEAELAEQQHLRQQAADESEFLRAELDELKKKREDTEKAQRSLTEIERGTIFWGFWLIGRRTEGPRQCRPLTLVHDNTGKAQANEQRYSKLKEKYSELVQNHADLLRKNAEVTKQVSVARQAQVDLEREKKELEDSFQRISDQAQRKGQIPCGLVVGLDLWKGDSLILPATPSSHSVALQSEAKWTAQIAELKKERGSLVDAVACREEELSTLREQLEYTQIKLSSTQASNRRPLGLTKSNFIPMGLGSITYSPRSGPFPAASSNWKNAGANISGLLHSVTLLAHLTSDTIVHGSTTCLRAPPEPADCKYQGEGPPPQHGEQGAFKSLCRLASAALTEACKQYGRETLTYLSFLEEEGIVENADSTAMRSCLARITAIGEELLPRGLDIKQEELGDLVDKEMAATSAAIETATARIEEMLSKSRAGDTGVKLEVNERILGSCTSLMQAIQVLIVASKELQREIVESGRVKADKDSPNLTQLQQASRGVNQATAAVVASTTSGKSQIEDTDSMDFSSMTLTQIKRQEMDSQVRVLELENELQKERQKLGELRKKHYELAGVAEGWEEGTEASPPTLQEAITEKE*