Sequence detailsbmy_19553 (Coding sequence)

Part of scaffold_2138 (SequenceType object (1))

For more information consult the page for scaffold_2138 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RBM12BENSBTAG00000013408 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000017837, Cow)

Protein Percentage 93.7%
cDNA percentage 93.5%
Ka/Ks Ratio 0.15809 (Ka = 0.0308, Ks = 0.1946)

RBM12B (Minke Whale)

Gene Details

RNA binding motif protein 12B

External Links

Gene match (Identifier: BACU000485, Minke Whale)

Protein Percentage 99.7%
cDNA percentage 99.4%
Ka/Ks Ratio 0.07027 (Ka = 0.0014, Ks = 0.0194)

Additional orthologs identified in other species via the OPTIC pipeline.

RBM12B (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 3171 bp    Location:137392..124895   Strand:-
Raw sequence 
>bmy_19553
ATGGGCAGACAAACTGTACGTCCGTTTGTCCGGACCAGAGGGGAGAGTGGGCGCCATCTTTTTCTAGGCTCACTGAGGGGTCTGCCTGTTTTGGGGAGGCTGCTGCGACGAGGAGTGCACCCCGCCCCGAGCCTTGTGGTTCCGACTCGGCAGCAGCGGTCATTATTGCTGTGGTTTGAGCTCAGCATGGCTGTAGTCATCCGTTTACTGGGGCTTCCTTTTATTGCGGGGCCTGTGGATATTCGTCACTTCTTCACGGGATTGACTATTCCTGATGGAGGAGTGCATATAATTGGAGGGGAAGTTGGGGAGGCTTTTATTATTTTTGCAACAGATGAAGATGCAAGACGTGCCATAAGTCGTTCAGGAGGGTTTATCAAGGATTCATCTGTAGAGCTTTTTCTTAGTAGTAAGGCAGAAATGCAGAAGACTATAGAAATGAAAAGAACTGATCGCATGGGAAGAGAGAGACCAGGATCTGGGGCACCAGGGGTTGGCAGCTTATCTAATTTTGTTGAGGCTATTAAAGAAGAAGCAAGTAATTCTGGCTATGGCTCTCCGATTAATCAAGATGCTGGGTTTCATACTAATGGTACAGGACAAGGTGATTTAAGGCCAAGAAAGACACGGCCATTGAAGGCAGAGAATCCTTACTTGTTTCTGCGAGGCTTGCCTTACTTAGTAAACGAAGATGATGTACGTGTCTTTTTCTCTGGTTTGTGTGTGGATGGAGTAATTTTCTTAAAGCATCATGATGGCCGAAATAATGGTGATGCCATAGTAAAATTTGCTTCATGTATCGATGCTTCAGGAGGTCTTAAATGTCATAGAAGTTTTATGGGCTCAAGATTTATTGAAGTAATGCAAGGCTCGGAACAACAGTGGATTGAGTTTGGAGGTAATGCAGTTAAGGAGGGTGACATTTCTATGAGGACTGAAGAACATTCTCCACCAAGAGGAATTAATGATAGACATTTTTGGAAACGATCTCATTCAAAATCTCCCAGAAGAACACGTTCTCGTTCTCCTCTTGGATTTTATGTTCACTTAAAAAATCTGTCCCTAAGTATTAACAAAAGAGATTTAAGAAATTTCTTTAGAGATACTGATCTGACTAATGAACAGATTAGGTTTTTATATAAGGATGAAAGAAGAACAAGATATGCCTTTGTGATGTTCAAGACTCTGAAAGACTATAACACTGCTCTGGGTTTACATAAGACTGTTTTACAGTATCGTCCAGTTCATATTGATCCAGTTTCTAGAAAACAGATGCTGAAGTTCATTGAATGTTATGAAAAGAAAAGACCAGCGTCAACAGAGAAAGAGAGGCTTGGACACGTTTCACAAAAATACTCTCAAGAAGGCTATTCTGGCCAGAAACTGTGCATATATATAAGAAATTTTCCATTTGATGTTACAAAAGTTGAAGTGCAGAAGTTCTTTGCAGACTTTTCTCTTGCTGAGGATGACATTTACTTGCTTTATGATGACAAAGGAGTTGGTCTAGGAGAAGCATTGGTGAAATTCAGATCAGAAGAACAGGCCGTGAAAGCTGAACGTTTAAACCGACGAAGATTCTTGGGGACAGAGGTGTTGTTAAGGCTCATATCTGAGGTACAAATGCGGGAGTTTGGTGTAAATTTTTCTTCAATGTCCAGTGAGAGGATGCATGACCATTCACAGTCATGTGATAGAGATGATCATTCCCATTCATTTGACTCAAATGATCTACCATTATACTCGGTTGGCCCTTCTGAAAACTTTAGGCATCAGCAAGAGGACTTGAGGCAACTGGACAATTTCAAGCATCCCCAGGGGGATTTCCGACCTCCTGAAAGGCGCCCTCCAGAAGACTTTAGGCATTCCCCAGAGGATTTCAGGCACTCCCCTGAAGACTTCAGGCGCCTTCGGGAGGAACACTTCAGGCGGCCTCCTGAGGAGGACTTCAGGCGCCCTTGGGAAGAGGACTTCAGACACTCTCCGGAGGAGGATTTCAGGCGCTCTCGGGAGGAGGACTGGAGGCGGCCACCGGAGGAGGATTTCAGGCGGCCTCCCAAGGAAGACTTCAGGAGACCCCCTGAGGAGGACTGGAGGCGGCCCCCCCAGGGAGACTTCAGGAGGCCACCTGAGGAGGATTGGAGACGGCCTCCTGAGGAGGACTTCAGACGGCTTCCCCCGGGGGAATGGAGGCGACCACCTGAGGAAGACTTCCGGCGGCCCCCTGAGGAGGATTTCAGGCGACTTCCAGAGGAAGACTTCCGGCGACCTCCTGAGGAGGACTTCAGGCGGCCCCACGAGGAGGACTTCAGGCGGTCTCCTGAGGAGGATTTCCGGCGTTCTCCTGAGAAGGACTTCCGGCGGCCACCCGCGGAACACTTCCGGCGGCCGCCCCCAGAGCACTTCCGGCGGCCGCCCCCGGAGCACTTCCGGCGGCCGCCTCAGGAGCATTTCCGGCGGCCGCCCCAGGAGCATTTCCGACGGCCGCCCCAGGAGCATTTCAGACGGCCGCCTCAGGAACATTTCAGGCGGCCATCCCAGGAGCATTTTAGGCGCCCCCGAGAGGAAGATTTTAGGCACCCACTGGATGAAGATTTCAGGGGCCCTCCAGATGAAGATTTTAGGCACCCTCCTGATGAGGACTTCAGGAGTCCCCAGGAGGAAGATTTTAGAAGCCCTTCTGATGAGGACTTCAGGCGGCTCCCGGAGGAAGACCTCAGGGAAGCTCCGGAGGAGGACCCTAGACTTACTGACAGTTTTAGACTTCCTGGTGAGGAGTTTAGGAGCCCCCCTGATGATTTTAGAAGTCATCGCCCTTTTGTGAATTTTGGTCGCCCAGAAGGTGGCAAGTTTGATTTTGGAAAGCGTAATATGGGAAGTTTTCCTGAGGGGAGATTTATGCCTGATCCAAAATTAAATTGTAATTCAGGTAGAGTAACACCCATTAAGATAATGAATCTTCCATTTAAAGCTAATGTTAATGAAATTCTAGACTTTTTCCATGGTTACAGAATCATACCTGATTCAGTTTCAATACAGTATAACGAGCAAGGATTACCTACAGGGGAAGCCATTGTTGCCATGATAAACTACAATGAAGCTATGGCTGCTATTAAAGATCTGAATGATAGGCCAGTTGGCCCCCGCAAAGTTAAGTTAATTTTGCTCTAG

Related Sequences

bmy_19553T0 SequenceType object (3)

Length: 1057 aa      View alignments
>bmy_19553T0
MGRQTVRPFVRTRGESGRHLFLGSLRGLPVLGRLLRRGVHPAPSLVVPTRQQRSLLLWFELSMAVVIRLLGLPFIAGPVDIRHFFTGLTIPDGGVHIIGGEVGEAFIIFATDEDARRAISRSGGFIKDSSVELFLSSKAEMQKTIEMKRTDRMGRERPGSGAPGVGSLSNFVEAIKEEASNSGYGSPINQDAGFHTNGTGQGDLRPRKTRPLKAENPYLFLRGLPYLVNEDDVRVFFSGLCVDGVIFLKHHDGRNNGDAIVKFASCIDASGGLKCHRSFMGSRFIEVMQGSEQQWIEFGGNAVKEGDISMRTEEHSPPRGINDRHFWKRSHSKSPRRTRSRSPLGFYVHLKNLSLSINKRDLRNFFRDTDLTNEQIRFLYKDERRTRYAFVMFKTLKDYNTALGLHKTVLQYRPVHIDPVSRKQMLKFIECYEKKRPASTEKERLGHVSQKYSQEGYSGQKLCIYIRNFPFDVTKVEVQKFFADFSLAEDDIYLLYDDKGVGLGEALVKFRSEEQAVKAERLNRRRFLGTEVLLRLISEVQMREFGVNFSSMSSERMHDHSQSCDRDDHSHSFDSNDLPLYSVGPSENFRHQQEDLRQLDNFKHPQGDFRPPERRPPEDFRHSPEDFRHSPEDFRRLREEHFRRPPEEDFRRPWEEDFRHSPEEDFRRSREEDWRRPPEEDFRRPPKEDFRRPPEEDWRRPPQGDFRRPPEEDWRRPPEEDFRRLPPGEWRRPPEEDFRRPPEEDFRRLPEEDFRRPPEEDFRRPHEEDFRRSPEEDFRRSPEKDFRRPPAEHFRRPPPEHFRRPPPEHFRRPPQEHFRRPPQEHFRRPPQEHFRRPPQEHFRRPSQEHFRRPREEDFRHPLDEDFRGPPDEDFRHPPDEDFRSPQEEDFRSPSDEDFRRLPEEDLREAPEEDPRLTDSFRLPGEEFRSPPDDFRSHRPFVNFGRPEGGKFDFGKRNMGSFPEGRFMPDPKLNCNSGRVTPIKIMNLPFKANVNEILDFFHGYRIIPDSVSIQYNEQGLPTGEAIVAMINYNEAMAAIKDLNDRPVGPRKVKLILL*