Part of scaffold_2154 (Scaffold)

For more information consult the page for scaffold_2154 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

C1orf174 ENSTTRG00000011760 (Bottlenosed dolphin)

Gene Details

chromosome 1 open reading frame 174

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011154, Bottlenosed dolphin)

Protein Percentage 84.65%
cDNA percentage 88.89%
Ka/Ks Ratio 0.52903 (Ka = 0.1025, Ks = 0.1937)

C16H1orf174 ENSBTAG00000024520 (Cow)

Gene Details

UPF0688 protein C1orf174 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000042269, Cow)

Protein Percentage 71.24%
cDNA percentage 78.47%
Ka/Ks Ratio 0.47997 (Ka = 0.215, Ks = 0.448)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 807 bp    Location:266746..277000   Strand:+
>bmy_19561
ACGCCGCGACGCGAGCCGAGGGCGGCCGGGTCGCTGCTCTGCTGGAAAGCGTTAGGCCGGGCGCTGGGGCTTGGCGACGGGGCTGGGGGCGGCAACGCGCCGCTCACACTCATGAGGAGCCGGAAGCTGGCAGGTGGAGTGCGGTCGTCAGCGCGCCTCCGAGCCCGGAGCTGCTTGGCCACATCGGCCTCGGCCCAGGAAGCCCGCGTCGCCACGTCTGCCCGGACGGCATGTCAGGCTTCCTCATCACACAAAGCCACCGACAGGCGAACGTCCAAGAAGTTCAAGTACGACAAAGGTCATCTTGTGAAGTCAGAATTCCAGAAAGCCATCCCCCAGAGTGACAGCACTGCTGCGCCCACAGCGCCCCCCGAGACCCCAGGTAAACACGAGCCTCTGGCATCGGCCGAGGATAGGGCCAGGCTTCCGGGAAAGGAAGCCAGCGGCTCCGCTCCTCAGGGGACCGCAGGACTCCCCCGGGGGCACTGTGGGGCCATGAGTGACGCCTGCCCTGCGGAGACTGAGGACAGGCCGCCCCCGCCAAGATGCGGGGCCCCTGCGGGAGGAGAGTCGGACGGTGGCTGCCCCGAGAGGGACGGGGCGGCGGCGGACCTGGAGCAGAGCCACACGCCCCCGCTGCAGATGGACAACAGCGTCCTTCTCGACGACGACAGCAACCAGCCGATGCCAGTGAGCCGCTTCTTCGGAAACGTCGAGCTCATGCAGGTAACGCCTGTGGCCTCTCCCCTGGGCAGGCAGCCCCCAGCAGACCGCATGCCTGCTCACGGCCCCAATTCACACGTGTGA

Related Sequences

bmy_19561T0 Protein

Length: 269 aa      View alignments
>bmy_19561T0
TPRREPRAAGSLLCWKALGRALGLGDGAGGGNAPLTLMRSRKLAGGVRSSARLRARSCLATSASAQEARVATSARTACQASSSHKATDRRTSKKFKYDKGHLVKSEFQKAIPQSDSTAAPTAPPETPGKHEPLASAEDRARLPGKEASGSAPQGTAGLPRGHCGAMSDACPAETEDRPPPPRCGAPAGGESDGGCPERDGAAADLEQSHTPPLQMDNSVLLDDDSNQPMPVSRFFGNVELMQVTPVASPLGRQPPADRMPAHGPNSHV*