Part of scaffold_2137 (Scaffold)

For more information consult the page for scaffold_2137 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

USP40 ENSTTRG00000004373 (Bottlenosed dolphin)

Gene Details

ubiquitin specific peptidase 40

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004120, Bottlenosed dolphin)

Protein Percentage 91.62%
cDNA percentage 92.06%
Ka/Ks Ratio 0.32929 (Ka = 0.0287, Ks = 0.0871)

BT.44648 ENSBTAG00000000149 (Cow)

Gene Details

Ubiquitin carboxyl-terminal hydrolase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000172, Cow)

Protein Percentage 90.59%
cDNA percentage 92.01%
Ka/Ks Ratio 0.28165 (Ka = 0.053, Ks = 0.1881)

USP40  (Minke Whale)

Gene Details

ubiquitin specific peptidase 40

External Links

Gene match (Identifier: BACU010991, Minke Whale)

Protein Percentage 97.95%
cDNA percentage 98.46%
Ka/Ks Ratio 0.42028 (Ka = 0.0115, Ks = 0.0275)

Genome Location

Sequence Coding sequence

Length: 2685 bp    Location:260717..205400   Strand:-
>bmy_19569
ATGTTTGGGGACCTGTTTGAAGAGGATTATTCCAGTGTGTCAAATGATCATTATGGAAAAGGGAAGAAATTAAAGACCAAAGCTTTGGAGCCCCCTGCTCCTAGAGGATTCACCAATTTAAGTGGAATCAGAAATCAGGGTGGAACCTGTTACCTCAATTCCCTTCTTCAGACGCTTCATTTCACACCTGAATTCAGAGAAGCTTTATTTTCTCTTGGCCCGGAAGAGCTTGGTTCGTTAGAGGATAAGGATAAACCTGACGCAAAGGTYCGAATCATACCTTTGCAGTTACAGCGGTTGTTTGCACAGCTTCTGCTCTTAGACCAGGAAGCTGCGTCCACCGCAGACCTCACTGACAGCTTTGGGTGGACCAGTGATGAGGAAATGAGGCAACATGATGTACAGGAACTGAATCGAATTCTCTTTAGTGCTTTGGAAACTTCTTTAGTTGGGACCTCCGGCCATGACCTCATCAATCGTCTATATCACGGAACCATTGTTAACCAGATTGTTTGTAAAGAATGTAAGAATGTCAGTGAAAAGCAGGAAGACTTCTTAGATCTCACAGTAGCGGTCAGAAATGTATCAGGTTTGGGAGATGCACTCTGGAACATGTATGTGGAAGAGGAAGTTTTTGACTCTGACAACTTGTACCACTGCGGGACTTGTGACAGGCTGGTTAAAGCAGCAAAGTCGGCCAAATTGCGTAAGCTGCCTCCCTTTCTTACTTTTTCATTATTAAGATTTAATTTTGATTTTGTGAAGTGTGAACGATACAAGGAAACAAGCTGTTATACGTTCCCTCTCCGGATCAATCTCAAGCCATTTTGTGAACAGAGTGAATTAGATGACTTGGAATATATGTATGACCTCTTCTCAGTTATTATACACAAAGGTGGTTGCTACGGAGGACATTATCATGTGTATATTAAAGATGTCGATCATTTGGGAAACTGGCAGTTTCAAGAGGACAAAAGTAATCCAGATGTGAATTTGGAAGATCTTCAAAATGAAGAAGAGATTGATGATCCATTGATGATTCTAAAAGCAGTCTTATTACAGGAGGAGAGTAATCTAATTCCTGTTGATCAGCTGGGCCAGAAACTCTTGAAAAAGATAGGAGTATCTTGGAATAAGAAGTACAGAAAACAGTATGGACCACTGCGAAAGTTTTTACAGCTTCATTCTCAGATATTTCTGCTCAGTTCAGATGAAAGTACAGTTAGTCTATTGAAGGACTGTTCTCTCCAGGCTGAGTCTGATATACGAGGAAATGATCAACAACTTTTGAAGACACTTACTTCAGAGCCCCCGGGATTAAATGATAGACCCTTCTGTCCCCACTGGTTTGATATAAACGATTCCAGAGTCCAGCCAATCAAGGAAAAGGATATTGAACAGCAATTTCAGGGTAAAGAAAGTGCCTACATGTTGTTTTATCGGAAATCCCAGTTGCAGAGACCCCCTGAAGCTCGAGCTAACCCAAGATACAGGGTTCCATGTCATTTGCTGAATGAAATGGATGCAGCCAACATCGAACTACAAATAAAAAGGGCAGAATGTGATTCTACAAACAATAATTTTGAATTGCATCTCCACCTCGGCCCTCATTATCATTTCTTCAATGGGGCTCTGCACCCAGTAGTCTCTCAAACAGAAAGCATGTGGGATTTGACCTTTGATAAAAGAAAAACTTTAGGAGATCTTCGACAATCAATATTTCAGCTGTTAGAATTTTGGGAAGGAGATATGGTTCTCAGTGTTGCAAAGTTTGTACCAGCAGGACTTCATGTTTACCAGACACTTGATGGAGATCACCTGACACTGTGTGAAATTGAAATTGCTGATGGGGAAGACATCTTTGTATGGAATGGGGTGGAGGTTGGCGGAATCCAGATTCCAGCTGGTAGTGACTGTGAACCTCTGCTTTTAAACGTTCTTCATCCGGCAACAAGCAATGAAGAAGAGGAGTGTCAGCAGTTGATAGACTCTCCACATGTCTTTCCATCTAATGCAGAAATAGGTAGTGTATTCACAGCCTTTGCAATCCCAGACGGAGTCATCTTAGTCAACAATACTGAGTCTGTAGGTGAAGAGAGCTGGACCACCATTCCCAAGGAAGACTTGAGGAAGACATTCAGAGAACAAGGTCTCAGAAACGGAAGCTCGATTTTAATTCAGGACTCTAATGACGGTAACAGTTTGTTGACCAAACAAGGGAAATGGATCACCAGTGTGAATGAGATTGACTGGCTCCAAGTTAAAAATTTATGCCAATTAGACTCTGAAGAAGAGCAAGTTAAAATATCAGCAACTCTTAACACAGTGGTGTTTGATATTCGAATTAAAGCCATAAAGGAATTAAAATTAATGAAGGAACTAGCTGAGGACAGCTGTTTGAGGCCTATTGATAGAAACGGGAAGCTTCTTTGTCCAGTGCCAGACAATTATACCCTGAAGGAAGCAGAATTGAAGATGGGGAGTTCATTGGGACTGTGTCCTGGAAAAGCACCAACTTCCTCTCAGCTGTTCCTGTTTTTCGCTGTGGGAAGCGATGTTCAGCCTGGGACAGAGATGGAGATCATAGTAGAAGAAACAATATCTGTGAGAGATGTAAGGAATTTTACTTTGGGTGGCCGCAGTCTGTGGGTGTTTGGTATGGGGAGCAGTGGTAACCTGTGTTAG

Related Sequences

bmy_19569T0 Protein

Length: 895 aa      View alignments
>bmy_19569T0
MFGDLFEEDYSSVSNDHYGKGKKLKTKALEPPAPRGFTNLSGIRNQGGTCYLNSLLQTLHFTPEFREALFSLGPEELGSLEDKDKPDAKVRIIPLQLQRLFAQLLLLDQEAASTADLTDSFGWTSDEEMRQHDVQELNRILFSALETSLVGTSGHDLINRLYHGTIVNQIVCKECKNVSEKQEDFLDLTVAVRNVSGLGDALWNMYVEEEVFDSDNLYHCGTCDRLVKAAKSAKLRKLPPFLTFSLLRFNFDFVKCERYKETSCYTFPLRINLKPFCEQSELDDLEYMYDLFSVIIHKGGCYGGHYHVYIKDVDHLGNWQFQEDKSNPDVNLEDLQNEEEIDDPLMILKAVLLQEESNLIPVDQLGQKLLKKIGVSWNKKYRKQYGPLRKFLQLHSQIFLLSSDESTVSLLKDCSLQAESDIRGNDQQLLKTLTSEPPGLNDRPFCPHWFDINDSRVQPIKEKDIEQQFQGKESAYMLFYRKSQLQRPPEARANPRYRVPCHLLNEMDAANIELQIKRAECDSTNNNFELHLHLGPHYHFFNGALHPVVSQTESMWDLTFDKRKTLGDLRQSIFQLLEFWEGDMVLSVAKFVPAGLHVYQTLDGDHLTLCEIEIADGEDIFVWNGVEVGGIQIPAGSDCEPLLLNVLHPATSNEEEECQQLIDSPHVFPSNAEIGSVFTAFAIPDGVILVNNTESVGEESWTTIPKEDLRKTFREQGLRNGSSILIQDSNDGNSLLTKQGKWITSVNEIDWLQVKNLCQLDSEEEQVKISATLNTVVFDIRIKAIKELKLMKELAEDSCLRPIDRNGKLLCPVPDNYTLKEAELKMGSSLGLCPGKAPTSSQLFLFFAVGSDVQPGTEMEIIVEETISVRDVRNFTLGGRSLWVFGMGSSGNLC*