Part of scaffold_2103 (Scaffold)

For more information consult the page for scaffold_2103 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PROX1 ENSTTRG00000003405 (Bottlenosed dolphin)

Gene Details

prospero homeobox 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003190, Bottlenosed dolphin)

Protein Percentage 95.95%
cDNA percentage 96.24%
Ka/Ks Ratio 0.44704 (Ka = 0.0312, Ks = 0.0698)

PROX1 ENSBTAG00000010978 (Cow)

Gene Details

prospero homeobox protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014573, Cow)

Protein Percentage 94.79%
cDNA percentage 93.2%
Ka/Ks Ratio 0.15725 (Ka = 0.0354, Ks = 0.2248)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2079 bp    Location:203853..218722   Strand:+
>bmy_19580
ATGCCTGACCATGACAGCACAGCCCTCTTAAGCCGGCAAACCAAGAGGAGAAGAGTTGACATTGGAGTGAAAAGGACGGTAGGGACAGCATCTGCATTTTTTGCTAAGGCAAGAGCAACGTTTTTTAGTGCCATGAATCCCCAAGGTTCCGAGCAGGATGTTGAGTATTCAGTGGTGCAGCATGCAGATGGGGAAAAGTCAAATGTACTCCGCAAGCTGCTGAAGAGGGCGAACTCATATGAAGATGCCATGATGCCTTTTCCAGGAGCAACCATAATTTCCCAGCTGTTGAAAAATAACATGAACAAAAATGGTGGCACGGAGCCCAGTTTCCAAGCCAGCGGTCTCTCTAGTACAGGCTCCGAAGTACATCAGGAGGATATATGCAGCAACTCTTCAAGAGACAGCCCCCCAGAGTGTCTTTCCCCTTTTGGCAGGCCTACTATGAGCCAGTTTGATATGGATCGCTTATGTGACGAGCACCTGAGAGCAAAGCGCGCCCGGGTTGAGAATATAATCCGGGGTATGAGCCATTCCCCCAGTGTGGCATTACGGGGCAATGACAATGAAAGAGATATGGCCCCACAGTCTGTGAGTCCCCGAGAAAGTTACCGAGAAAACAAACGCAAGCAGAAGCTGCCCCAGCAGCAGCAACAGAGTTTCCAGCAGCTGGTTTCAGCCCGCAAAGAACAGAAGCGAGAGGAGCGCCGACAGCTGAAACAGCAGCTGGAAGACATGCAGAAACAGCTGCGCCAGCTGCAGGAAAAGTTCTACCAGATCTATGACAGCACTGATTCTGAAAATGATGAAGATGGTAACCTGTCTGAAGACAGCATGCGCTCGGAGATCCTGGATGCCAGGGCCCAGGACTCCGTGGGGAGGTCAGACAATGAGATGTGCGAGCTGGACCCGGGGCAGTTCATCGACCGAGCCCGGGCCCTGATCCGGGAGCAGGAAATGGCCGAAAACAAGCCGAAGCGAGAAGGCAACAACAAAGAAAGAGACCACGGGCCAAACTCCTTACAACCCGAAGGCAAACATTTGGCCGAGACCTTGAAACAGGAACTGAACACTGCCATGTCGCAAGTTGTGGACACTGTGGTCAAAGTCTTCTCGGCCAAACCCTCTCGCCAGGTTCCTCAGGTCTTCCCGCCGCTCCAGATCCCCCAGGCCAGATTTGCAGTCAACGGGGAGAACCACAATTTCCACACCGCCAACCAGCGCCTGCAGTGCTTTGGCGACGTCATCATTCCGAACCCCCTGGACACCTTTGGCAATGTGCAGATGCCCAGTTCCACAGACCAGACAGAAGCACTGCCCCTGGTGGTCCGCAAAAACTCATCTGACCAGCCTGCCTCCGGCCCCCCTGCCGGCGGTCACCACCAGCCCCTGCACCAGTCGCCTCTGTCGGCCACCGCAGGCTTTACCACGTCCACCTTCCGCCACCCCTTTCCCCTCCCCTTGATGGCCTACCCGTTTCAGAGTCCATTAGGTGCTCCCTCCGGCTCCTTCTCGGGAAAAGACAGAGCCTCTCCTGAATCCTTAGACTTAACTAGGGAGACCACGAGTCTGAGGACCAAGATGTCATCCCACCACCTGAGCCACCATCCTTGTTCACCAGCACATCCACCCAGCACCGCAGAAGGGCTCTCCTTGTCTCTCATCAAATCCGAGTGTGGCGATCTTCAAGACATGTCCGAAATCTCACCTTATTCGGGAAGTGCAATATCCTTTCATTTGCCCCCCAAGGAAAACAAGCCCAAACCAAAAAGGCTTCCCAGAAGCTCCAACATGCTGAAAACCTACTTCTCTGATGTAAAGTTCAACAGATGCATTACCTCTCAGCTCATCAAGTGGTTTAGCAATTTCCGTGAGTTTTACTACATTCAGATGGAGAAGTACGCGCGTCAAGCCATCAACGATGGGGTCACCAGTACCGAAGAGCTGTCTATAACCAGAGACTGTGAGCTGTACAGGGCTCTGAACATGCACTACAATAAAGCAAATGACTTTGAGGTAGGAACTCATCTTTGTTTTTCGGTCATCTCCCTTTTTTTTAAAAAAAATTATTTTCTTTAG

Related Sequences

bmy_19580T0 Protein

Length: 693 aa      View alignments
>bmy_19580T0
MPDHDSTALLSRQTKRRRVDIGVKRTVGTASAFFAKARATFFSAMNPQGSEQDVEYSVVQHADGEKSNVLRKLLKRANSYEDAMMPFPGATIISQLLKNNMNKNGGTEPSFQASGLSSTGSEVHQEDICSNSSRDSPPECLSPFGRPTMSQFDMDRLCDEHLRAKRARVENIIRGMSHSPSVALRGNDNERDMAPQSVSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKREERRQLKQQLEDMQKQLRQLQEKFYQIYDSTDSENDEDGNLSEDSMRSEILDARAQDSVGRSDNEMCELDPGQFIDRARALIREQEMAENKPKREGNNKERDHGPNSLQPEGKHLAETLKQELNTAMSQVVDTVVKVFSAKPSRQVPQVFPPLQIPQARFAVNGENHNFHTANQRLQCFGDVIIPNPLDTFGNVQMPSSTDQTEALPLVVRKNSSDQPASGPPAGGHHQPLHQSPLSATAGFTTSTFRHPFPLPLMAYPFQSPLGAPSGSFSGKDRASPESLDLTRETTSLRTKMSSHHLSHHPCSPAHPPSTAEGLSLSLIKSECGDLQDMSEISPYSGSAISFHLPPKENKPKPKRLPRSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEVGTHLCFSVISLFFKKNYFL*