Sequence detailsbmy_19581 (Coding sequence)

Part of scaffold_2120 (SequenceType object (1))

For more information consult the page for scaffold_2120 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000003878 (Bottlenosed dolphin)

Gene Details

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003637, Bottlenosed dolphin)

Protein Percentage 79.59%
cDNA percentage 84.35%
Ka/Ks Ratio 0.44325 (Ka = 0.1382, Ks = 0.3117)

PF4ENSBTAG00000011961 (Cow)

Gene Details

platelet factor 4 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000015874, Cow)

Protein Percentage 66.67%
cDNA percentage 73.79%
Ka/Ks Ratio 0.32994 (Ka = 0.2404, Ks = 0.7285)

Additional orthologs identified in other species via the OPTIC pipeline.

Pf4 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 510 bp    Location:39524..38439   Strand:-
Raw sequence 
>bmy_19581
ATGAAGCAGGGCCTGGGGGAGGTCGGGGGCGGCGGGGAGAGAGCGCGGGAGCCCCCGGGGCTGGGGCCGAGTCTGTGCCCGTCTCGGTTCCCAGCTGTGATCGACCGAGCGCGGCCAAGAGTGCAGGCGCTGTGCCAGGTGCTGCCCGGTGCGCTCTACCACCTGGACAATAATACACTTTCTGAGGGAGGTCTGGAAGTGAAGGTCAGACGCCACGCCACGAGAAGATCCCTAATGTACCTCTGGCTATTCACAGAGTCGTCACTCCCCACTGTCCCCGCCCCACCCGCAGCAGGCTCTGAAGGTGGAGCTGGAGACCTGCGCTGCGTGTGTGTGAAGACCACCTCTGCGGTCCATCCCCGGCGCATCTCCAGCCTGGAGGTGATCGGGGCTGGACTCCACTGCCCTAGCCCCCAACTGATAGCTACGCTGAAGGACGGGAGGAAAATTTGCCTGGACCCGCAGAATCCTCTGTATAAGAAAATAATCAAGAAACTTTTGAAGACTTAG

Related Sequences

bmy_19581T0 SequenceType object (3)

Length: 170 aa      View alignments
>bmy_19581T0
MKQGLGEVGGGGERAREPPGLGPSLCPSRFPAVIDRARPRVQALCQVLPGALYHLDNNTLSEGGLEVKVRRHATRRSLMYLWLFTESSLPTVPAPPAAGSEGGAGDLRCVCVKTTSAVHPRRISSLEVIGAGLHCPSPQLIATLKDGRKICLDPQNPLYKKIIKKLLKT*