Sequence details bmy_19582 (Coding sequence)

Part of scaffold_2120 (Scaffold)

For more information consult the page for scaffold_2120 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PPBP ENSBTAG00000032425 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000043338, Cow)

Protein Percentage 72.27%
cDNA percentage 84.03%
Ka/Ks Ratio 0.95982 (Ka = 0.1853, Ks = 0.1931)

PPBP  (Minke Whale)

Gene Details

pro-platelet basic protein (chemokine (C-X-C motif) ligand 7)

External Links

Gene match (Identifier: BACU008220, Minke Whale)

Protein Percentage 95.74%
cDNA percentage 97.87%
Ka/Ks Ratio 0.61979 (Ka = 0.0191, Ks = 0.0308)

Additional orthologs identified in other species via the OPTIC pipeline.

PPBP (Human)   Ppbp (Mouse)  

Genome Location

Sequence Coding sequence

Length: 387 bp    Location:44645..43862   Strand:-
Raw sequence 
>bmy_19582
ATGAACCTCAGAGGCAGCACCACCCCCTCCTGTACCAGGGCCATCCCACTTCCTGTCCTGCAGGTGTTGCTGCCGATGTCACTGCTCCTGACCACGCTGGTTCCCTCCACCACTGGAGAACGTAAGAGAAACTTAGGGAAAGCTGAAGTTAAAAGTATGGATAGAATGCTGTACGTTGAACTTCGCTGCTCATGTGTGAAGACCACCTCTGGCATTCATCCCAGTAACATCCAGAGTTTGCAAGTGACCAGGGCAGGACCCCACTGCACCAACGTCGAAGTAATAGCAACGTTGAAGAATGGGAAGAAAATCTGCCTGGACCCAGAAGCTCCCAGAATCAAGAAAATAGTCCAGAAAATATTGGAAGATGGTGGGTCAGCTGCTTAA

Related Sequences

bmy_19582T0 Protein

Length: 129 aa      View alignments
>bmy_19582T0
MNLRGSTTPSCTRAIPLPVLQVLLPMSLLLTTLVPSTTGERKRNLGKAEVKSMDRMLYVELRCSCVKTTSGIHPSNIQSLQVTRAGPHCTNVEVIATLKNGKKICLDPEAPRIKKIVQKILEDGGSAA*