Sequence detailsbmy_19582 (Coding sequence)

Part of scaffold_2120 (SequenceType object (1))

For more information consult the page for scaffold_2120 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PPBPENSBTAG00000032425 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000043338, Cow)

Protein Percentage 72.27%
cDNA percentage 84.03%
Ka/Ks Ratio 0.95982 (Ka = 0.1853, Ks = 0.1931)

PPBP (Minke Whale)

Gene Details

pro-platelet basic protein (chemokine (C-X-C motif) ligand 7)

External Links

Gene match (Identifier: BACU008220, Minke Whale)

Protein Percentage 95.74%
cDNA percentage 97.87%
Ka/Ks Ratio 0.61979 (Ka = 0.0191, Ks = 0.0308)

Additional orthologs identified in other species via the OPTIC pipeline.

PPBP (Human)   Ppbp (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 387 bp    Location:44645..43862   Strand:-
Raw sequence 
>bmy_19582
ATGAACCTCAGAGGCAGCACCACCCCCTCCTGTACCAGGGCCATCCCACTTCCTGTCCTGCAGGTGTTGCTGCCGATGTCACTGCTCCTGACCACGCTGGTTCCCTCCACCACTGGAGAACGTAAGAGAAACTTAGGGAAAGCTGAAGTTAAAAGTATGGATAGAATGCTGTACGTTGAACTTCGCTGCTCATGTGTGAAGACCACCTCTGGCATTCATCCCAGTAACATCCAGAGTTTGCAAGTGACCAGGGCAGGACCCCACTGCACCAACGTCGAAGTAATAGCAACGTTGAAGAATGGGAAGAAAATCTGCCTGGACCCAGAAGCTCCCAGAATCAAGAAAATAGTCCAGAAAATATTGGAAGATGGTGGGTCAGCTGCTTAA

Related Sequences

bmy_19582T0 SequenceType object (3)

Length: 129 aa      View alignments
>bmy_19582T0
MNLRGSTTPSCTRAIPLPVLQVLLPMSLLLTTLVPSTTGERKRNLGKAEVKSMDRMLYVELRCSCVKTTSGIHPSNIQSLQVTRAGPHCTNVEVIATLKNGKKICLDPEAPRIKKIVQKILEDGGSAA*