Part of scaffold_2125 (Scaffold)

For more information consult the page for scaffold_2125 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LHFPL5 ENSTTRG00000014335 (Bottlenosed dolphin)

Gene Details

lipoma HMGIC fusion partner-like 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013588, Bottlenosed dolphin)

Protein Percentage 98.17%
cDNA percentage 98.17%
Ka/Ks Ratio 0.08905 (Ka = 0.0059, Ks = 0.0659)

LHFPL5 ENSBTAG00000016834 (Cow)

Gene Details

tetraspan membrane protein of hair cell stereocilia

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022392, Cow)

Protein Percentage 98.17%
cDNA percentage 94.67%
Ka/Ks Ratio 0.02051 (Ka = 0.006, Ks = 0.2922)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 660 bp    Location:258708..269104   Strand:+
>bmy_19630
ATGGTGAAGTTGCTGCCTGCCCAGGAGGCAGCCAAGATCTACCATACCAACTATGTGCGGAACTCGAGGGCCGTAGGTGTGATGTGGGGCACACTCACCATCTGCTTCTCCGTGCTGGTCATGGCGCTCTTCATCCAGCCCTACTGGATCGGTGACAGCGTCAGCACACCCCAGGCAGGCTACTTTGGCCTTTTCTCCTACTGCGTGGGCAACGTGCTGTCATCTGAGCTTATCTGCAAGGGTRGCCCGCTGGACTTCTCCTCCATCCCCTCTAGAGCCTTCAAGACTGCCATGTTCTTTGTGGCCTTGGCCATGTTCCTCATCATTGGCTCCATCATCTGCTTCAGCCTGTTCTTTGTCTGCAACACGGCCACTGTCTACAAGATCTGTGCATGGATGCAGCTGGCTGCGGCCACAGGCCTGATGATTGGCTGCCTGGTCTACCCAGATGGTTGGGACTCAAGTGAGGTACGGCGCATGTGTGGGGAGCAGACCGGCAAATACACACTGGGCCACTGCACCATCCGCTGGGCCTTCATGCTGGCCATCCTCAGCATTGGAGACGCCCTCATCCTCTCCTTCTTGGCCTTTGTGCTGGGCTACCGCCAGGACAAGCTGCTCCCTGACGACTATAAGGCCGATGGAAAAGAGGAAGTCTGA

Related Sequences

bmy_19630T0 Protein

Length: 220 aa      View alignments
>bmy_19630T0
MVKLLPAQEAAKIYHTNYVRNSRAVGVMWGTLTICFSVLVMALFIQPYWIGDSVSTPQAGYFGLFSYCVGNVLSSELICKGXPLDFSSIPSRAFKTAMFFVALAMFLIIGSIICFSLFFVCNTATVYKICAWMQLAAATGLMIGCLVYPDGWDSSEVRRMCGEQTGKYTLGHCTIRWAFMLAILSIGDALILSFLAFVLGYRQDKLLPDDYKADGKEEV*