Part of scaffold_2142 (Scaffold)

For more information consult the page for scaffold_2142 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000010355 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009823, Bottlenosed dolphin)

Protein Percentage 74.71%
cDNA percentage 75.86%
Ka/Ks Ratio 0.23718 (Ka = 0.0133, Ks = 0.0559)

SOD2 ENSBTAG00000006523 (Cow)

Gene Details

Superoxide dismutase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008569, Cow)

Protein Percentage 92.17%
cDNA percentage 92.17%
Ka/Ks Ratio 0.12448 (Ka = 0.0373, Ks = 0.2994)

SOD2  (Minke Whale)

Gene Details

superoxide dismutase 2, mitochondrial

External Links

Gene match (Identifier: BACU019703, Minke Whale)

Protein Percentage 98.2%
cDNA percentage 99.0%
Ka/Ks Ratio 0.60608 (Ka = 0.0086, Ks = 0.0142)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 684 bp    Location:30529..19831   Strand:-
>bmy_19635
CGGGCGCAGGGGGCGGGGCCGCGGGGAGCGGCGGTGTACTTGCTGCGAAGCCCGCAACTCGAGCCCATCTTCGGCTGTCAGCGCGGCGGGGCGGTTAGAGATCCAAGAGGCCCGCGGGCGGCGTCCACCATGTTGTGCCGGGCGGCGTGCAGCACGAGCAGGAAGCTGGTGCCGGCCCTGGGGGCTCTGGGCTCCCGGCGGAAGCACAGCCTCCCCGACCTGCCGTACGACTATGGCGCCCTGGAGCCCCACATCAACGCGCAGATCATGCAGCTGCATCACAGCAAGCACCACGCGGCCTACGTGAACAACCTGAACATCGCCGAGGAGAAATATCGGGAGGCGCTGGAGAAGGGTGATGTTACAGCTCAGGTAGCTCTACAGCCTGCAATAAAGTTCAACGGTGGAGGCCATATCAATCATAGCATTTTCTGGACAAATCTGAGCCCTAACGGTGGTGGAGAACCCGAAGGGGAGTTGCTGGAAGCCATCAAACGTGACTTTGGTTCCTTCAAGAACTTGAAGGAGAAGTTGACCGCCGTATCCGTTGGTGTCCAAGGCTCAGGCTGGGGTTGGCTCGGTTTCAGTAAGGAACAGGGACGCTTACAGATTGCTGCTTGTTCTAACCAGGATCCCCTGCAAGGAACAACAGGGGAACTACTGTTTGGGAAAGCTGTTCGGTAA

Related Sequences

bmy_19635T0 Protein

Length: 228 aa      View alignments
>bmy_19635T0
RAQGAGPRGAAVYLLRSPQLEPIFGCQRGGAVRDPRGPRAASTMLCRAACSTSRKLVPALGALGSRRKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNIAEEKYREALEKGDVTAQVALQPAIKFNGGGHINHSIFWTNLSPNGGGEPEGELLEAIKRDFGSFKNLKEKLTAVSVGVQGSGWGWLGFSKEQGRLQIAACSNQDPLQGTTGELLFGKAVR*