Part of scaffold_2142 (Scaffold)

For more information consult the page for scaffold_2142 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TCP1 ENSTTRG00000010393 (Bottlenosed dolphin)

Gene Details

t-complex 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009856, Bottlenosed dolphin)

Protein Percentage 98.28%
cDNA percentage 98.2%
Ka/Ks Ratio 0.15684 (Ka = 0.0079, Ks = 0.0502)

TCP1 ENSBTAG00000002829 (Cow)

Gene Details

T-complex protein 1 subunit alpha

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003662, Cow)

Protein Percentage 97.0%
cDNA percentage 94.44%
Ka/Ks Ratio 0.07406 (Ka = 0.0144, Ks = 0.1938)

Genome Location

Sequence Coding sequence

Length: 1905 bp    Location:108602..98164   Strand:-
>bmy_19638
ATGGCTGCAGCTTCGATTGCCAATATTGTGAAAAGTTCTCTTGGTCCAGTTGGCTTGGATAAAATGTTAGTGGATGATATTGGTGATGTAACCATTACTAATGATGGTGCAACCATCCTGAAGTTACTGGAGGTGGAACACCCTGCAGCCAGAGTTCTTTGCGAGCTCGCTGACCTGCAAGACAAAGAAGTGGGAGACGGAACTACCTCTGTGGTTATTATTGCAGCAGAACTTCTAAAAAATGCAGATGAACTAGTCAAACAGAAAATTCATCCCACATCAGTTATTAGTGGCTATCGACTTGCTTGCAAGGAAGCAGTGCGTTATATCAATGAGAATCTAATTATTAACACTGATGAACTTGGAAAGGATTGCCTGATCAATGCTGCTAAGACATCGATGTCTTCCAAAATCATTGGAATAAGTGGTGATTTCTTTGCTAATATCGTGGTAGATGCTGTACTTGCTGTTAAATACACGGATGTCAGAGGCCAGCCTCGCTATCCAGTCAATTCCATTAATATTCTGAAAGCCCATGGGAGAAGTCAGATGGAAAGTATGCTCATCAATGGCTATGCACTCAACTGTGTGGTGGGATCCCAGGGCATGCCCAAGAGAATAGTTAATGCAAAAATTGCTTGCCTTGACTTCAGCCTGCAGAAAACAAAAATGAAGCTTGGTGTACAAGTGGTTATTACAGACCCTGAAAAACTGGACCAGATTAGACAGAGAGAATCAGATATCGCCAAGGAGCGAATCCAGAAGATCCTGGCAACTGGTGCCAATGTTATTCTAACCACTGGTGGAATTGATGACATGTGTCTGAAGTATTTTGTGGAGACTGGTGCTATGGCAGTTCGAAGAGTTTTAAAAAGGGACCTTAAACGCGTTGCTAAAGCTTCCGGAGCAACTATTCTGTCGAGCCTGGCCAATTTGGAAGGTGAAGAAACTTTTGAAGCTTCAATGTTGGGACAAGCAGAAGAGGTGGTACAGGAGAGAATTTGCGATGATGAACTGATCTTGATTAAAAAAGAATCAGATATCGCCAAGGAGCGAATCCAGAAGATCCTGGCAACTGGTGCCAATGTTATTCTAACCACTGGTGGAATTGATGACATGTGTCTGAAGTATTTTGTGGAGACTGGTGCTATGGCAGTTCGAAGAGTTTTAAAAAGGGACCTTAAACGCGTTGCTAAAGCTTCCGGAGCAACTATTCTGTCGAGCCTGGCCAATTTGGAAGGTGAAGAAACTTTTGAAGCTTCAATGTTGGGACAAGCAGAAGAGGTGGTACAGGAGAGAATTTGCGATGATGAACTGATCTTGATTAAAAACACTAAGGCTCGTACCTCTGCGTCGGTCATCTTACGCGGGGCAAATGATTTCATGTGTGACGAGATGGAGCGCTCTTTACATGATGCGCTTTGTGTGGTGAAGAGAGTTTTGGAGTCGAAATCTGTGGTTCCTGGTGGCGGCGCCGTAGAAGCGGCCCTGTCCATATACCTCGAAAACTACGCAACCAGCATGGGCTCCCGGGAACAGCTTGCTATTGCCGAGTTTGCAAGATCTCTTCTTGTTATTCCCAATACTCTGGCAGTTAATGCTGCCCAAGACTCCATAGATCTGGTTGCAAAATTAAGAGCTTTTCATAATGAGGCTCAAGTTAACCCAGAACGCAAAAATCTAAAATGGATTGGTCTTGACTTGGTCAATGGTAAACCCCGAGACAACAAACAAGCAGGGGTGTTTGAACCAACCATAGTTAAAGTTAAAAGTTTGAAATTTGCAACTGAAGCTGCAATTACCATTCTTCGAATTGATGATCTTATTAAATTACACCCAGAAAGCAAAGATGATAAGCATGGAGGTTACGAAGATGCTGTTCACTCTGGAGCCCTTGATGACTGA

Related Sequences

bmy_19638T0 Protein

Length: 635 aa      View alignments
>bmy_19638T0
MAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAARVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIINTDELGKDCLINAAKTSMSSKIIGISGDFFANIVVDAVLAVKYTDVRGQPRYPVNSINILKAHGRSQMESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDIAKERIQKILATGANVILTTGGIDDMCLKYFVETGAMAVRRVLKRDLKRVAKASGATILSSLANLEGEETFEASMLGQAEEVVQERICDDELILIKKESDIAKERIQKILATGANVILTTGGIDDMCLKYFVETGAMAVRRVLKRDLKRVAKASGATILSSLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKARTSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSIDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDDKHGGYEDAVHSGALDD*