Sequence detailsbmy_19640 (Coding sequence)

Part of scaffold_2142 (SequenceType object (1))

For more information consult the page for scaffold_2142 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PNLDC1ENSTTRG00000010409 (Bottlenosed dolphin)

Gene Details

poly(A)-specific ribonuclease (PARN)-like domain containing 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009872, Bottlenosed dolphin)

Protein Percentage 71.11%
cDNA percentage 72.2%
Ka/Ks Ratio 0.3784 (Ka = 0.0209, Ks = 0.0553)

PNLDC1ENSBTAG00000015166 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000020180, Cow)

Protein Percentage 92.64%
cDNA percentage 91.0%
Ka/Ks Ratio 0.12043 (Ka = 0.0384, Ks = 0.3185)

Additional orthologs identified in other species via the OPTIC pipeline.

PNLDC1 (Human)   Pnldc1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1668 bp    Location:119001..137500   Strand:+
Raw sequence 
>bmy_19640
GGGGCCAAGTGTAAGATCAAACGCCCGTGGGCGGGCAGGTGGCCGGCGCCGCCCTCCGCCGGTCAGAGGCCCCCGGGGCTGGTGGTGGCGCGCGGGAGCATCCGGTTTCCCCGCCGCGAGCCCTTTAAGGAGGCGGCGCGGCGGAAGCGCGTGGCAGCACGTGGCCGCACTGGGCGCTCTCGGCCGAGCTGCGTGGCCATGGACGTGGGCGCCGATGAGTTCGAGCAGAGCCTCCCTCTGTTGCAGGAGCTCGTCCTGGGCGCGGACTTCGTGGGTCTAGACGTCGAGTTCACCGGCCTTCGTTCTAACCTGTCCGGGCCCCAGCAGATCAGTCTGTTTGACTTGCCATCAGAGTGGTATCTAAAGACCCGTCAGAGTGTTCAGCAGTTCACCGTCTGTCAGATTGGGTTGTCTGTGTTTTCCAGTATTGAAGGCGAGTCAAACAAGTATGTAGCCCATTCGTGTAACTTCTTTCTCTTCCCTACAACGTTTGGGATTTTGGATTCAGAGTTCTCTTTCCAGGCTTCTAGTGTTCAGTTTTTGAATCAGTATGGCTTCGATTATAACAAGTTTCTCAAAAATGGAATCCCGTATATGAACGAAGAACAGGAGAAGAAAATTAAACACAGCATCCTGACTGGGAACTGGAGAGTTCGCAGTTCTCTGGATAAAGACCAAATCAAGGTGGTGATTGACGAGGTGACGCGCTGGCTGGACCTGGCAGAGGAAGGCGACTGGATGACCCTCCCTGGTATCACCGGCTTCCAGGCCTTCGAGGTCCAGCTTGTGCTGAGGAAGGCCCTCCCTGACATCTGGACGGTGATGAGAGATGAGGGGGTGACAGTGAAGAAAGTGAGTAAACAGCATCGCTGGTATCTTGAGAACACCTCTTGCGATCGAGAGAGCTGTTGGAAGGAGAAGATTCTTCTSTCTGCGAGGGGTTTTTCGGTGTTTTTCCAGATGCTGGTGAAAGCCCAGAAGCCCTTAGTGGGACATAATATGATGATGGATCTGCTGCATCTCCATGAGAAGTTCTTCAGACCTCTCCCAGAAAGCTATGATGAATTTAAGCTGAATATCCACAACCTATTTCCTGTTCTCATTGATACCAAAAATGTGACAAAGGATATCTGGAAGACGAAGTATCCCCATGAAGCAGCGTACGATGCCTTCCTGTGCGGATCAGTTCTTTTGAAAGTGGCCCACTTGCTCCTGTGGAGAGTGCACGGGGCTCTTCCCATCCCCGAGCCCTCCTTCCCGCTGTACCTCGACGTGCTGGCTCCCTATGTGAACCAGGTGAATCTTATCCGAGCCGGGGTCCCCACGATCAATTTTTCGGGTCCAGATTACCCCAGTATCCGCCCTCCCATCCTCATCGTCACCGTCAGGAGGTGGCCCGGGGTCAGCGAGCAGCAAGTCTACCACGAGTTTCAGAACCTCGGCAAGTTTGACGTCAGGAGACTGGTGGGGAGCCAGTTCCTGCTCCTGACCAATAAGTTTAAGGACACCCGGAGCATCCTGAAGGAGTACAGGTGCCACCCCACCCTGCAGGTCTCCCTGTACCGCTACTGGAGACACTCCCCGAACGTCAGCTGCCTGTTACAGGTCTGTGGCGTAGTCACCACCTGGGCCTTTATCGCGTTTCTCCTGGGAAGAGCTCGCCCCTGA

Related Sequences

bmy_19640T0 SequenceType object (3)

Length: 556 aa      View alignments
>bmy_19640T0
GAKCKIKRPWAGRWPAPPSAGQRPPGLVVARGSIRFPRREPFKEAARRKRVAARGRTGRSRPSCVAMDVGADEFEQSLPLLQELVLGADFVGLDVEFTGLRSNLSGPQQISLFDLPSEWYLKTRQSVQQFTVCQIGLSVFSSIEGESNKYVAHSCNFFLFPTTFGILDSEFSFQASSVQFLNQYGFDYNKFLKNGIPYMNEEQEKKIKHSILTGNWRVRSSLDKDQIKVVIDEVTRWLDLAEEGDWMTLPGITGFQAFEVQLVLRKALPDIWTVMRDEGVTVKKVSKQHRWYLENTSCDRESCWKEKILLSARGFSVFFQMLVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYDEFKLNIHNLFPVLIDTKNVTKDIWKTKYPHEAAYDAFLCGSVLLKVAHLLLWRVHGALPIPEPSFPLYLDVLAPYVNQVNLIRAGVPTINFSGPDYPSIRPPILIVTVRRWPGVSEQQVYHEFQNLGKFDVRRLVGSQFLLLTNKFKDTRSILKEYRCHPTLQVSLYRYWRHSPNVSCLLQVCGVVTTWAFIAFLLGRARP*