Sequence details bmy_19661 (Coding sequence)

Part of scaffold_2168 (Scaffold)

For more information consult the page for scaffold_2168 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

THSD7B  (Minke Whale)

Gene Details

thrombospondin, type I, domain containing 7B

External Links

Gene match (Identifier: BACU010013, Minke Whale)

Protein Percentage 91.5%
cDNA percentage 93.15%
Ka/Ks Ratio 0.53922 (Ka = 0.0595, Ks = 0.1103)

Additional orthologs identified in other species via the OPTIC pipeline.

THSD7B (Cow)   THSD7B (Human)   Thsd7b (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2103 bp    Location:286272..19602   Strand:-
Raw sequence 
>bmy_19661
ATGACGGAATGCCTCAAGCAGACAAATGGCATGCCTCCCCTTGTGCAAGAATGTACAGTACCCTGTCATGATGACTGCACCTTCACTGCTTGGTCCAAGTTTACGCCCTGCTCCACGAATTGTGAAACAACTCGAAGTAGACGGCGACAGCTCACAGGGAAAAGCAGGAAGAAGGAGAAATGCCAGGATGCTGGCCTGTACCCTCTAGTGGAAACAGAACCATGTCCTTGTGATGTGTTTACATCTCATCCTTACGGAAATTGGTCAGATTGCATTCTTCCTGAAGGCAGAAGGGAGCCTCAGAGAGGATTGCGGGTACAAGGAGACAGCAAAGAATGTGGAGAAGGCATGCGTTTTCGAGCAATAGCCTGCTCTGATAAAAATGGAAGACCTGTTGACCCCACCCACTGCAACAGCTCTGGTTATATTCAAGAAGAATGTGTCATCCCCTGTCCATTTGATTGCAAGTTAAGTGATTGGTCTAGTTGGGGGTCTTGCAGTTCATCTTGTGTTGGAGTGAGAATTCGATCCAAATGGCTGAAAGAAAAACCGTACAATGGAGGTCGCCCATGTCCCAAATTGGATCTCAAGAATCAGCAGGGTAATACTATTTTAGAGAATACTTTCTTTCCAAAGATAAACAGGTATCCAAAGGTGGCTTTGGATGAGAAAATTTTCTATAGAGAATATTTTAGAGAATACTTTCTTTCCAAAGATAAACAGGTACACGAGGCAGTCCCGTGTTACAGTGAGTGCAATCAGTATTCCTGGGTTGTAGAACACTGGTCTCCATGCAAAATCCACAATGAGCTGAGGTCCCTGCGCTGTGGAGGAGGAATGCAATCTAGGAAAATCAGTTCATTTAGCTGTGTTCAGAYATCATTTTCTGATTGCTCAGATGAGCAGTCGTGTGATCCACACACAACRCAGAGAAGAACCCGCCATCTGCTGAGGCCCTCGCTGAGCTCAAGGACATGCGCTGAAGACTCACAGGTGCGGCCCTGCCTCCTCAATGAAAATTGCTTCCAGTTCCAGTACAATCTAACAGGTCAAATGAGCCGGACTCGATTTATCATTATGCCAACCCAAGGAGAAGGACGGCCATGCCCCACAGAGCTTACCCAGCAGAAAACCTGCCCAGTGACCCCCTGCTACAGCTGGGTCCTCAGCAACTGGTCTGCATGTAAATTGGAGGGTGGAGACTGTGGGGAAGGAGTCCAGATCCGCAGCCTCTCCTGTGTGGTCCACAATGGTTCAATGTCTCACTGGACTGTACCTGTAGACAATGCACTGTGTGGAGAGATGCCCTTTCAAGACAGTATCCTGAAGCAGCCATGTTCTGTGCCTTGCCCAGGAGACTGCCATTTAACGGAATGGTCAGAGTGGAGCACGTGTGAACTGACCTGCATCGATGGAAGAAGCTTCGAGACTATGGGTCGCCAGTCTAGGTCAAGGACATTTATAATTCAGTCTTTTGAGAACCAAGACAGTTGCCCCCAGCAGGAGGTAAATGTTATCACTACACATGGAAAGCAAGTCTTTGGAACAATAATGAACGAACTGTATGGTGCCAACGTTCAGATGGCATTAACGTCACAGGTATTCCTGCCTAAGATTCATGTGGGCACTTCAAAAAGATCTCTGAGCGTTGCTGGTGGAGGCTGCTCCCCTCAGGCACGCCCTGCTGCTATACGGCAGTGTAACCCGGCCTGCAGAAAACCTTTCTCCTACTGTACACAGGGTGGAGTCTGCGGCTGTGAGAAGGGCTATACAGAGATCATGAGATCCAATGGTTTCCTGGATTACTGCATGAAAGTTCCTGGCTCAGAGGACAAAAAAGCTGATGTGAAAAATCTTGCTGGGAAAAACAGACCTGTGAATTCAAAAATACATGATATTTTTAAAGGATGGTCTCTTCAACCCCTTGATCCAGATGGCCGAGTGAAAATCTGGGTTTATGGCGTTTCAGGTGGTGGTTTTCTTATCATGATTTTCCTAGTATTTACTTCCTACCTTGTTTGCAAGAAGCCAAAACCACATCAAAGCACACCTCCCCAACAGAAGCCTCTGACCTTAGCCTACGATGGAGACTTAGACATGTAA

Related Sequences

bmy_19661T0 Protein

Length: 701 aa      
>bmy_19661T0
MTECLKQTNGMPPLVQECTVPCHDDCTFTAWSKFTPCSTNCETTRSRRRQLTGKSRKKEKCQDAGLYPLVETEPCPCDVFTSHPYGNWSDCILPEGRREPQRGLRVQGDSKECGEGMRFRAIACSDKNGRPVDPTHCNSSGYIQEECVIPCPFDCKLSDWSSWGSCSSSCVGVRIRSKWLKEKPYNGGRPCPKLDLKNQQGNTILENTFFPKINRYPKVALDEKIFYREYFREYFLSKDKQVHEAVPCYSECNQYSWVVEHWSPCKIHNELRSLRCGGGMQSRKISSFSCVQXSFSDCSDEQSCDPHTTQRRTRHLLRPSLSSRTCAEDSQVRPCLLNENCFQFQYNLTGQMSRTRFIIMPTQGEGRPCPTELTQQKTCPVTPCYSWVLSNWSACKLEGGDCGEGVQIRSLSCVVHNGSMSHWTVPVDNALCGEMPFQDSILKQPCSVPCPGDCHLTEWSEWSTCELTCIDGRSFETMGRQSRSRTFIIQSFENQDSCPQQEVNVITTHGKQVFGTIMNELYGANVQMALTSQVFLPKIHVGTSKRSLSVAGGGCSPQARPAAIRQCNPACRKPFSYCTQGGVCGCEKGYTEIMRSNGFLDYCMKVPGSEDKKADVKNLAGKNRPVNSKIHDIFKGWSLQPLDPDGRVKIWVYGVSGGGFLIMIFLVFTSYLVCKKPKPHQSTPPQQKPLTLAYDGDLDM*