Part of scaffold_2147 (Scaffold)

For more information consult the page for scaffold_2147 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CAPRIN2 ENSTTRG00000008463 (Bottlenosed dolphin)

Gene Details

caprin family member 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008023, Bottlenosed dolphin)

Protein Percentage 69.79%
cDNA percentage 71.55%
Ka/Ks Ratio 0.62875 (Ka = 0.1081, Ks = 0.172)

CAPRIN2 ENSBTAG00000019373 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000031373, Cow)

Protein Percentage 91.11%
cDNA percentage 92.91%
Ka/Ks Ratio 0.4631 (Ka = 0.0578, Ks = 0.1249)

CAPRIN2  (Minke Whale)

Gene Details

caprin family member 2

External Links

Gene match (Identifier: BACU006099, Minke Whale)

Protein Percentage 96.25%
cDNA percentage 97.23%
Ka/Ks Ratio 0.74884 (Ka = 0.0264, Ks = 0.0352)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2061 bp    Location:335091..294177   Strand:-
>bmy_19664
GAGCGGCTAAGTCGGCGGGGCGTCCGGCGCCGCAGACGCCGCCAGCGAGGACTGGGAAGGGAGAGGGAGGAGACAGGAGGAGGAGACGCGAGTGCGGGGTGGCGCCGGTCCACCTCCGCAGCTCTCCTGGCTCCCGCCGGCTTTCGAAGGCGGGCCCGTGCTGCGGCAGCGGCGGCGGCAGCGGCCTCGGCGGCCTGCGGAGCCTCATCTGTTTCAATGGTGCAACTCTCTTCATCTCCTTTTGGTTACCAGTCACCTTCAGGCCATTCGGAGGAGGGAAAAGAGGGGACTATGAAGTCAGCCAGGCCCCAAGTGAACCACAGTCAGCATGGGGAAAGCCAGCGGGCCATGAGCCCCTTGCAGCCTGCTCTCAGTTCTGCTGCCTCTCCTTCCCAAGCATATGAGACATATATTGATAATGGACTCATATGCCTTAAACACAAAATCAGAAACATCGAGAAAAAGAAGCTCAAACTGGAAGATTACAAGGATCGCCTGAAAAATGGAGAGCAACTTAATCCAGACCAGTTGGAAGCAGTTGAGAAATATGAAGAAGTGCTACATAACTTAGAATTTGCCAAGGAGCTTCAGAAAACCTTTTCTGGACTGAGCCAAGATCTGCTTAAAGCGCAGAAGAAAGCCCAGAGAAGGGAGCACATGCTAAAACTTGAGGCTGAGAAGAAAAAGCTTCGCACTATACTTCAAGTTCATGTTGAAGACCAGATGGAGCAGTCATCCTTGTACTTTTGGGACCTTTTGGAAGGTAGTGAGAAAGCAGTGGTAGGAACGACATACAAACACATGAAAGATCTACTATCTAAATTGCTGAACTCAGGCTATTTTGAAAGTATCCCAGTTCCAAAAAATGCTAAGGAAAAAGAGGTATCATTGGAGGAAGAAATGCTAATAAAATCAGAGAAGAAAAAACAATTATCGAAGACTGAATCTGTCAAAGAGTCAGGATCATTCCATTTAAAACCGTTGTTTAAAAATTTTCTTAACAGACGCTACATGACAGAAGTAGATTATTCAAGTAAACAAGATGAAGAGCAATCTTGGGAAGCAGATTATGCTAGAAAACCAAATCTCCCCAAATGTTGGGATGTGCTTACCGAACCAGATGGTCAGGAGAAGAAACAGGAATCCTTCAAGTCCTGGGAGTCTTCCGTTAAGCACCAGGAGGTATCAAAGCCCGCAGTTTCCTTAGAACAGAGGAAACAAGAGATTCCAAAACTCAGGTCCACTCTGCAGGAAGAGCAGAAGAAGCAGGATGTCTCGAAAACCAAGTCAGCTCCCAGCCAGTGGAAGCCAGAAGCTCTTAAGTCCAAAGTGGGGTACATTCAGGAGGAACAGAAGAAGCAGGAGACACCAAAGCCTTGGCCAGTTCAGCTGCAGAAAGAACAGGATCCAAAGAAGCAAACTCCAAAGCCTTGGACACCTTCTGTGCAGAGTGAACAGGACATCACCAAGTCATGGGCCACTCCCATGTGTGAAGAACAGGATTCAAGACAGCCAGAGACTCCAAAATCCTGGGAAAACAATGTTGAGAGTCAAAAACACCCTTTAACATCACAATCACAGATTTCTCCAAAGTCCTGGGGGGTAGCTACAGCAAGCCTCATACCAAATGACCAGCTGCTGCCCAGGAAGTTTAATACAGAACCCAAAGATGTGCCTAAGCCTATGCATCAGCCTGTAGGTTCTTCCTCTACCCTTCCAAAGGATCCAGTATTGAGGAAGGAAAAACTGCAGGATCTGATGACCCAGATTCAAGGAACTTGTAACTTTATGCAAGAATCTATTCTGGATTTTGACAAACCTCCAAGTGCAATTCCATCATCACAGCCGCCTTCAGCTACTCCAGGTAGCCCAGTAGCATCTACAGAACAAAATCTATCCAATCAAAGTGATTTTCTTCAAGAGCCATTACAGGCTGCTTCTTCTCCAGTTACTTGTAGCTCAAATGCTTGCTTGGTTACTACCGATCAGGCCTCTTCGGGATCTGAAACAGAGTTTATGACCTCAGAGACTCCTGAGGTAATAAGAGACCAATTGTCTTAA

Related Sequences

bmy_19664T0 Protein

Length: 687 aa      View alignments
>bmy_19664T0
ERLSRRGVRRRRRRQRGLGREREETGGGDASAGWRRSTSAALLAPAGFRRRARAAAAAAAAASAACGASSVSMVQLSSSPFGYQSPSGHSEEGKEGTMKSARPQVNHSQHGESQRAMSPLQPALSSAASPSQAYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEQLNPDQLEAVEKYEEVLHNLEFAKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTILQVHVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLSKTESVKESGSFHLKPLFKNFLNRRYMTEVDYSSKQDEEQSWEADYARKPNLPKCWDVLTEPDGQEKKQESFKSWESSVKHQEVSKPAVSLEQRKQEIPKLRSTLQEEQKKQDVSKTKSAPSQWKPEALKSKVGYIQEEQKKQETPKPWPVQLQKEQDPKKQTPKPWTPSVQSEQDITKSWATPMCEEQDSRQPETPKSWENNVESQKHPLTSQSQISPKSWGVATASLIPNDQLLPRKFNTEPKDVPKPMHQPVGSSSTLPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPPSAIPSSQPPSATPGSPVASTEQNLSNQSDFLQEPLQAASSPVTCSSNACLVTTDQASSGSETEFMTSETPEVIRDQLS*