Sequence details bmy_19667 (Coding sequence)

Part of scaffold_2124 (Scaffold)

For more information consult the page for scaffold_2124 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

OBFC1 ENSTTRG00000003375 (Bottlenosed dolphin)

Gene Details

oligonucleotide/oligosaccharide-binding fold containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003164, Bottlenosed dolphin)

Protein Percentage 89.43%
cDNA percentage 93.05%
Ka/Ks Ratio 0.7756 (Ka = 0.0692, Ks = 0.0893)

OBFC1 ENSBTAG00000015019 (Cow)

Gene Details

CST complex subunit STN1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019995, Cow)

Protein Percentage 84.29%
cDNA percentage 88.1%
Ka/Ks Ratio 0.42557 (Ka = 0.1008, Ks = 0.2369)

OBFC1  (Minke Whale)

Gene Details

oligonucleotide/oligosaccharide-binding fold containing 1

External Links

Gene match (Identifier: BACU012344, Minke Whale)

Protein Percentage 93.43%
cDNA percentage 94.67%
Ka/Ks Ratio 0.66512 (Ka = 0.0507, Ks = 0.0762)

Additional orthologs identified in other species via the OPTIC pipeline.

OBFC1 (Human)   Obfc1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1053 bp    Location:112225..149295   Strand:+
Raw sequence 
>bmy_19667
ATGCAGTCTGAATCCAGCCGGTGTGAAGAGGAAACTCCTTCCCTCTTGTGGGGTTTGGATCCTGTGTTTCTAGCCTTCGCAAAACTCTACATCAGGGATATCCTGGACTTGAAGGAGTCCCGCCAGGTGCCAGGTGTATTTTTTTACAGTGGGCATCCAATAAAACAGGTAGATATCTTGGGAACTGTAATTGGAGTGAGAGAAAGAGATGCTTTCTACAGTTATGGAGTGGATGATAGCACTGGAGTTATAAACTGCATCTGCTGGAAGAAATTGAATAATAGCAAATCCTCATCAGATGCTCCGAGTGCAAGAGAGCTGAGCTTAACCTCACAGCTTAAGAAGCTGCAAGAGACCATTGCGCAGAGAACAAAGGTAGAAATTGGGGACATTATCCGGATCAGAGGTCACGTCCGCATGTACAGAGGAGAGCGAGAAATTCATGCCACTGCTTATTTTTTACATGCGTCCAAAAGGAACAAAAGTAATAGTTTTCTGCAGGGCTTGTTAAAACTCTCCCCCAGCAGCAATCCAGGCGCCCTGGACCTTGACAGTCTCACGTATCTGCTGAGTGAAAAAGTCAAAGAATTCCTTGTGGAGAACAGAGTGCAAACCTTTTACCAGCAGGAGTTGGAAACGGTGGAGTCCCTGCTGTCCCTTGCCAACCAGCCTGTGATTCACAGCGCCTGCTCCGGGCGAGTGGATTTTAAGAATGACACCACTTCCAAGGCAATTCATAGTATATTTAGGAATGCTATAAAGCTGCTGCAGGAAAAAGGACTTGTTTTCCAGAAAGATGGTGGTTTTGATAACCTATTCTATGTAACCAGAGAAGACAAAGAATTGCACAGAAAGATCCACCAGATCATTCAAGAAGACTGCCAGAAACCAAATCACGTGGAGAAGGGCTGCCACTTCCTGCACATCCTGGCCTGTGCTCACCTGAGCCTCAGCCCAGGCCTGAGTGAAACTGTGCTGCGGCAGGTGCTGGAGCTCTTGGAGGACCAGAGTGACATCGTCAGCACCACAGAGAACTACTACACTGCGTTCTGA

Related Sequences

bmy_19667T0 Protein

Length: 351 aa      View alignments
>bmy_19667T0
MQSESSRCEEETPSLLWGLDPVFLAFAKLYIRDILDLKESRQVPGVFFYSGHPIKQVDILGTVIGVRERDAFYSYGVDDSTGVINCICWKKLNNSKSSSDAPSARELSLTSQLKKLQETIAQRTKVEIGDIIRIRGHVRMYRGEREIHATAYFLHASKRNKSNSFLQGLLKLSPSSNPGALDLDSLTYLLSEKVKEFLVENRVQTFYQQELETVESLLSLANQPVIHSACSGRVDFKNDTTSKAIHSIFRNAIKLLQEKGLVFQKDGGFDNLFYVTREDKELHRKIHQIIQEDCQKPNHVEKGCHFLHILACAHLSLSPGLSETVLRQVLELLEDQSDIVSTTENYYTAF*