Sequence detailsbmy_19680 (Coding sequence)

Part of scaffold_2139 (SequenceType object (1))

For more information consult the page for scaffold_2139 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000006231 (Bottlenosed dolphin)

Gene Details

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005895, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.12%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0252)

BT.49331ENSBTAG00000015000 (Cow)

Gene Details

transitional endoplasmic reticulum ATPase

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019970, Cow)

Protein Percentage 99.88%
cDNA percentage 96.2%
Ka/Ks Ratio 0.00429 (Ka = 0.0006, Ks = 0.14)

Additional orthologs identified in other species via the OPTIC pipeline.

VCP (Human)   Vcp (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2505 bp    Location:243947..258191   Strand:+
Raw sequence 
>bmy_19680
ATGGCCTCCGGAGCTGATTCAAAAGGTGATGATTTATCAACAGCCATTCTTAAACAGAAGAACCGTCCCAATCGGTTAATTGTTGATGAAGCCATCAATGAGGACAACAGTGTGGTATCCTTGTCCCAGCCCAAGATGGATGAGCTGCAGTTGTTCCGAGGTGACACAGTGTTGCTGAAAGGAAAGAAGAGGCGGGAAGCTGTGTGCATTGTGCTTTCTGATGACACATGTTCTGATGAGAAGATTCGAATGAATAGAGTTGTTCGGAATAACCTTCGCGTACACCTGGGGGATGTCATCAGCATCCAGCCATGCCCTGATGTGAAGTACGGCAAACGTATCCATGTACTACCCATCGATGACACRGTGGAAGGCATCACTGGCAATCTCTTCGAGGTTTACCTTAAGCCGTACTTCCTGGAAGCTTATCGACCCATCCGGAAAGGAGACATTTTCCTTGTCCGGGGTGGAATGCGTGCCGTAGAGTTCAAAGTAGTGGAGACAGATCCCAGTCCTTACTGTATTGTTGCTCCAGACACAGTGATTCACTGTGAAGGGGAGCCTATCAAACGAGAGGATGAGGAAGAGTCTTTGAATGAAGTGGGCTATGATGACATTGGTGGCTGCAGGAAGCAGCTAGCTCAGATAAAGGAGATGGTGGAGCTGCCCCTGAGACATCCTGCTCTCTTTAAGGCAATTGGTGTGAAGCCTCCTCGGGGAATCCTGCTCTATGGACCTCCGGGGACTGGAAAGACCCTGATTGCTCGAGCTGTGGCGAATGAGACTGGCGCCTTCTTCTTTTTGATCAATGGTCCTGAGATCATGAGCAAGTTGGCTGGTGAGTCTGAGAGCAACCTTCGTAAAGCCTTTGAAGAGGCTGAGAAGAATGCTCCTGCTATTATTTTCATTGATGAGTTGGATGCCATTGCTCCCAAAAGAGAGAAAACCCATGGGGAGGTGGAGCGGCGTATCGTRTCACAGTTGTTGACCCTCATGGATGGCCTAAAGCAGAGAGCCCATGTCATTGTTATGGCAGCAACCAATAGACCCAACAGCATTGACCCAGCCCTACGACGATTTGGTCGCTTTGACAGGGAGGTAGATATTGGAATCCCTGATGCTACAGGACGCTTGGAAATTCTTCAGATCCACACCAAGAACATGAAGCTGGCAGATGATGTGGACCTTGAACAGGTAGCCAATGAAACTCATGGGCATGTGGGCGCTGACTTAGCAGCCCTGTGTTCGGAGGCTGCTCTGCAAGCCATCCGCAAGAAGATGGACCTCATTGACCTAGAGGACGAGACCATCGATGCTGAGGTCATGAACTCCCTGGCAGTTACTATGGATGACTTCCGATGGGCCCTGAGCCAGAGCAACCCATCAGCACTGCGGGAAACTGTGGTAGAGGTACCACAGGTGACCTGGGAGGACATTGGGGGCCTGGAGGATGTCAAACGTGAGCTTCAGGAGCTGGTCCAGTATCCCGTGGAGCACCCAGACAAATTCCTCAAGTTTGGTATGACACCTTCCAAGGGAGTACTGTTCTATGGACCTCCTGGTTGTGGGAAAACCTTGCTGGCCAAAGCCATTGCTAATGAGTGCCAGGCCAACTTCATCTCCATCAAGGGTCCTGAGCTGCTCACCATGTGGTTTGGGGAGTCTGAGGCCAATGTCAGGGAAATCTTTGACAAGGCCCGCCAAGCTGCCCCCTGTGTACTGTTCTTTGATGAGCTGGATTCGATTGCCAAGGCCCGTGGTGGCAACATTGGAGATGGTGGTGGGGCTGCTGACCGAGTCATCAACCAGATCCTGACAGAAATGGATGGCATGTCCACAAAAAAAAATGTGTTTATCATTGGCGCTACCAACCGGCCTGACATCATTGATCCTGCCATTCTGCGACCTGGCCGCCTTGATCAGCTCATCTACATCCCACTTCCTGATGAGAAGTCCCGTGTTGCCATTCTCAAGGCCAACCTGCGCAAGTCCCCAGTTGCCAAGGCAGGTGCAAGGTCTTGGGGTCATGGGGACTTCTGTGAATCTGCAGGCTGTGTGGAGTGGTGTTTGGTTCCTGGACAAGATTCCGATGTGGATTTGGAGTTCCTGGCTAAGATGACTAATGGCTTCTCTGGAGCTGACTTGACAGAGATTTGCCAACGTGCTTGCAAGCTGGCCATCCGTGAATCGATCGAGAGTGAGATCAGGCGAGAACGGGAGAGGCAGACCAACCCATCAGCCATGGAGGTAGAAGAGGATGATCCAGTGCCTGAGATCCGTCGAGATCACTTTGAGGAAGCCATGCGCTTTGCCCGCCGTTCTGTCAGTGATAATGACATCAGGAAGTATGAGATGTTTGCTCAGACCCTTCAACAGAGTCGGGGCTTTGGCAGCTTCAGATTCCCTTCAGGAAACCAAGGTGGAGCTGGCCCCAGTCAGGGCAGTGGCGCTGGCACAGGTGGCAGTGTGTACACGGAAGATAATGACGATGACCTATATGGCTAA

Related Sequences

bmy_19680T0 SequenceType object (3)

Length: 835 aa      View alignments
>bmy_19680T0
MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKAGARSWGHGDFCESAGCVEWCLVPGQDSDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGGAGPSQGSGAGTGGSVYTEDNDDDLYG*