Sequence details bmy_19691 (Coding sequence)

Part of scaffold_2155 (Scaffold)

For more information consult the page for scaffold_2155 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PSCA ENSTTRG00000013909 (Bottlenosed dolphin)

Gene Details

prostate stem cell antigen

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013187, Bottlenosed dolphin)

Protein Percentage 56.1%
cDNA percentage 68.29%
Ka/Ks Ratio 0.52304 (Ka = 0.3814, Ks = 0.7293)

PSCA ENSBTAG00000047022 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000055128, Cow)

Protein Percentage 44.0%
cDNA percentage 58.93%
Ka/Ks Ratio 0.03754 (Ka = 0.4825, Ks = 12.8531)

Additional orthologs identified in other species via the OPTIC pipeline.

PSCA (Human)   Psca (Mouse)  

Genome Location

Sequence Coding sequence

Length: 390 bp    Location:246300..257430   Strand:+
Raw sequence 
>bmy_19691
ATGCTGATGCTGACGCGGGGCCACCACGAGCCAAGGCCCCTTCTCGGCTCCGGCAGCTTCCCGGCCCTCTCTGCAGGGGGGACCAGCGTCAGCCGCCCTAGGCTTCCACGGCTGGAACCTCCAGCCTTCTCTGCAGGGACGGTGGCAGCTTCTCCCCTCAAACACGGACCGGAGGGTGCTGTTGATCTCCTGACCCTCATCAGCAAGGGCTGCAGCTCGCACTGCGTGGAGGACTCAGAGAACTACTACGTGGGCAAGAAAAACGTCACATGCTGCTCTACTGACCTGTGCAACGCCAGCGGGGCCCCCGCCCTGCAGCCGGCCATTGTCACCCTGACACCACTCACCGTTCTTGGCGTGCTGCTGTTCTGGGGCCCCGGGCAGCTGTAG

Related Sequences

bmy_19691T0 Protein

Length: 130 aa      View alignments
>bmy_19691T0
MLMLTRGHHEPRPLLGSGSFPALSAGGTSVSRPRLPRLEPPAFSAGTVAASPLKHGPEGAVDLLTLISKGCSSHCVEDSENYYVGKKNVTCCSTDLCNASGAPALQPAIVTLTPLTVLGVLLFWGPGQL*