Part of scaffold_2176 (Scaffold)

For more information consult the page for scaffold_2176 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TATDN1 ENSTTRG00000005951 (Bottlenosed dolphin)

Gene Details

TatD DNase domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005629, Bottlenosed dolphin)

Protein Percentage 84.21%
cDNA percentage 88.65%
Ka/Ks Ratio 0.66674 (Ka = 0.1158, Ks = 0.1737)

TATDN1 ENSBTAG00000033446 (Cow)

Gene Details

Putative deoxyribonuclease TATDN1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000044772, Cow)

Protein Percentage 85.14%
cDNA percentage 87.27%
Ka/Ks Ratio 0.27902 (Ka = 0.0988, Ks = 0.3541)

TATDN1  (Minke Whale)

Gene Details

TatD DNase domain containing 1

External Links

Gene match (Identifier: BACU013231, Minke Whale)

Protein Percentage 85.54%
cDNA percentage 89.96%
Ka/Ks Ratio 0.79736 (Ka = 0.1055, Ks = 0.1323)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 927 bp    Location:248286..197169   Strand:-
>bmy_19702
ATGAGTCGTTTCAAATTCGTAGATATTGGTATCAACTTGACAGATCCTGTGTTCAGAGGAATTTATAGGGGGGTTCAAAAGCATCCAGATGACTTACAGGATGTAATACAGAGAGCTGTTCAGATTGGTGTTAAAAAGTTTATGATTACAGGTGGAAATCTACAAGACAGTAAAGATGCACTGCATTTGGCACAGACAAATGATATGTTTTTCAGTACAGTTGGGTGTCATCCTACAAGATGTGATGAATTTGAAAAGAATAACCCTGATCTTTACTTGATGGAGTTACTAAATCTCGCTGAAAACAACAAGGGGAAAGTTGTAGCAATAGGGGAATGTGGACTTGATTTTGACCGACTGCAGTTTTGTCCTAAAGGTACTCAGCTCAAATATTTTGAAAAACAGTTTGAACTGTCAGAACAAACAAAATTACCAATGTTTCTTCATTGTCGGAACTCACATGCTGAATTTTTGGACATAATGAGAAGGAATAGAGATCTGTGTGTAGGTGGAGTGGTGCATTCATTTGACGGTACCAAGGAAGCAGCAGCTGCTTTGATGGACTTGGGTCTCTACATAGGATTTAATGGTTGCTCACTGAAAACTGAGGCTAATTTGGAAGTTCTGAAGGCAATACCTAGTGAAAAATTAATGATTGAGACTGTAGTTTTAACAGGTAAGAGTATGTTAGATAAGCCAGATCTAAAATTCAGCGAGCAGAAAAATAAAGAATTATTCTATAAAGATACACTGGAAAGATTTTCCTTTATTAACATGCTGATGTTGGCAAAGACTTTAAAACTGAATGTTTTAAATTCTGTAAGTCAAATACTGGAAATAATGTCAGCAGTAAGAGATGAAGATCCACTGGAACTAGCCAATACGCTATATAACAACACTATTAAAATATTTTTTCCTGACATGTAA

Related Sequences

bmy_19702T0 Protein

Length: 309 aa      View alignments
>bmy_19702T0
MSRFKFVDIGINLTDPVFRGIYRGVQKHPDDLQDVIQRAVQIGVKKFMITGGNLQDSKDALHLAQTNDMFFSTVGCHPTRCDEFEKNNPDLYLMELLNLAENNKGKVVAIGECGLDFDRLQFCPKGTQLKYFEKQFELSEQTKLPMFLHCRNSHAEFLDIMRRNRDLCVGGVVHSFDGTKEAAAALMDLGLYIGFNGCSLKTEANLEVLKAIPSEKLMIETVVLTGKSMLDKPDLKFSEQKNKELFYKDTLERFSFINMLMLAKTLKLNVLNSVSQILEIMSAVRDEDPLELANTLYNNTIKIFFPDM*