Part of scaffold_2176 (Scaffold)

For more information consult the page for scaffold_2176 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MTSS1 ENSTTRG00000005955 (Bottlenosed dolphin)

Gene Details

metastasis suppressor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005632, Bottlenosed dolphin)

Protein Percentage 92.5%
cDNA percentage 92.75%
Ka/Ks Ratio 0.40951 (Ka = 0.0454, Ks = 0.1109)

MTSS1 ENSBTAG00000020407 (Cow)

Gene Details

metastasis suppressor protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027195, Cow)

Protein Percentage 91.18%
cDNA percentage 89.37%
Ka/Ks Ratio 0.19919 (Ka = 0.0636, Ks = 0.3195)

MTSS1  (Minke Whale)

Gene Details

metastasis suppressor 1

External Links

Gene match (Identifier: BACU013232, Minke Whale)

Protein Percentage 99.36%
cDNA percentage 98.87%
Ka/Ks Ratio 0.07045 (Ka = 0.0028, Ks = 0.0401)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1602 bp    Location:274260..248322   Strand:-
>bmy_19704
ATGCTGCGGCCCGTGATTGAAGAAGAAATCTCAATGCTGGGGGAAATAACTCACCTGCAGACCATATCGGAAGATCTGAAAAGCCTGACCATGGACCCTCACAAACTGCCCTCCTCAAGTGAACAGGTGATTTTGGACTTGAAAGGTTCTGATTACAGTTGGTCGTACCAGACTCCACCCTCTTCCCCCAGCACCACCATGTCCCGCAAATCAAGTGTCTGCAGCAGCCTGAACAGTGTCAACAGCAGCGACTCGCGGTCCAGCGGCTCCCACGGCTCCCACTCGCACTCGCCCAGCTCCCACTACCGCTACCGCGGCTCCAGCCTGGCCCAGCAGGCGCCCGTGAGGCTGTCCAGCGTGTCCTCCCATGACTCAGGGTTCATCTCCCAGGACGCCTTCCAGTCCAAGTCGCCATCCCCCATGCCGCCGGAGGCCCCCAACCAGAACTCGTCCAGCTCGGCCTCCTCGGAAGCCTCGGAAACCTGCCAGTCAGTGAGCGAGTGCAGCTCGCCCACCTCGGTCAGCTCAGGCTCCACCATGGGCGCCTGGGCGTCCACGGAGAAGGACTGGGCCAAGCCAGGACCTTACGATCAGCCTCTGGTGAACACCCTTCAGCGCCGCAAAGACAAGCGAGAGCCAGACCCCAGCGGTGGAGGCCCCGTCGCAGCGGGAGGCGCGCCCACCGCTGCCGAGGAGGCTCAGAGGCCGCGGAGCATGACCGTGTCGGCCGCCACCAGGCCTGGAGAGGAGATGGAGGCTTGTGAGGAACTGGCCCTGGCCCTGTCTCGGGGCCTCCAGCTTGACACCCAGAGGAGCAGCCGGGACTCGCTTCAGTGCTCCAGCGGCTACAGCACCCAGACCACCACCCCCTGCTGCTCCGAGGACACCATCCCCTCCCAAGTTTCAGATTACGATTATTTCTCTGTAAGTGGTGACCAGGAGGCAGATCAGCAGGAGTTTGACAAATCCTCCACCATTCCGAGAAACAGTGACATCAGCCAGTCCTACCGACGGATGTTTCAAGCGAAGCGCCCAGCCTCAACTGCTGGCCTCCCCACCACCCTCGGACCTACTGTGGTCACCCCAGGGGTTGCAACCATCCGACGGACCCCTTCCACCAAGCCTTCTGTCCGCCGGGGGACCATAGGAGCTGGTCCCATCCCCATCAAAACACCCGTGATCCCTGTCAAGACCCCCACCGTCCCAGACCTCCCTGGGGTGTTGCCAGCCCCTCCAGATGGGCCCGAGGAGCGGGGTGAGCACAGCCCCGAGTCGCCGTCCGTGGGTGAGGGCCCCCAGGGTGGCACCAGCATGCCCTCCTCAATGTGGAGCGGCCAAGCCTCCGTCAACCCTCCTCTTCCAGGCCCGAAGCCGAGCATCCCCGAGGAGCACAGACAAGCAATTCCAGAAAGCGAGGCCGAAGACCAGGAAAGGGATCCCCCAAGTGCCAGTGCCTCCCCAGGCCAGATTCCAGAGAGTGACCCTGCAGACCTGAGCCCAAGGGATGCCCCGCAAGGAGAAGACATGCTGAACGCCATCCGCAGGGGCGTGAAACTGAAGAAGACCACGACAAACGACCGCTCAGCCCCACGCTTTACTTAG

Related Sequences

bmy_19704T0 Protein

Length: 534 aa      View alignments
>bmy_19704T0
MLRPVIEEEISMLGEITHLQTISEDLKSLTMDPHKLPSSSEQVILDLKGSDYSWSYQTPPSSPSTTMSRKSSVCSSLNSVNSSDSRSSGSHGSHSHSPSSHYRYRGSSLAQQAPVRLSSVSSHDSGFISQDAFQSKSPSPMPPEAPNQNSSSSASSEASETCQSVSECSSPTSVSSGSTMGAWASTEKDWAKPGPYDQPLVNTLQRRKDKREPDPSGGGPVAAGGAPTAAEEAQRPRSMTVSAATRPGEEMEACEELALALSRGLQLDTQRSSRDSLQCSSGYSTQTTTPCCSEDTIPSQVSDYDYFSVSGDQEADQQEFDKSSTIPRNSDISQSYRRMFQAKRPASTAGLPTTLGPTVVTPGVATIRRTPSTKPSVRRGTIGAGPIPIKTPVIPVKTPTVPDLPGVLPAPPDGPEERGEHSPESPSVGEGPQGGTSMPSSMWSGQASVNPPLPGPKPSIPEEHRQAIPESEAEDQERDPPSASASPGQIPESDPADLSPRDAPQGEDMLNAIRRGVKLKKTTTNDRSAPRFT*