Sequence detailsbmy_19739 (Coding sequence)

Part of scaffold_2192 (SequenceType object (1))

For more information consult the page for scaffold_2192 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NOX5ENSTTRG00000002683 (Bottlenosed dolphin)

Gene Details

NADPH oxidase, EF-hand calcium binding domain 5

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002519, Bottlenosed dolphin)

Protein Percentage 16.67%
cDNA percentage 33.6%
Ka/Ks Ratio 0.0719 (Ka = 1.1546, Ks = 16.058)

NOX5ENSBTAG00000009030 (Cow)

Gene Details

NADPH oxidase 5

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000011888, Cow)

Protein Percentage 56.83%
cDNA percentage 67.18%
Ka/Ks Ratio 0.28859 (Ka = 0.3441, Ks = 1.1924)

NOX5 (Minke Whale)

Gene Details

NADPH oxidase, EF-hand calcium binding domain 5

External Links

Gene match (Identifier: BACU017959, Minke Whale)

Protein Percentage 68.98%
cDNA percentage 76.73%
Ka/Ks Ratio 0.6505 (Ka = 0.247, Ks = 0.3798)

Additional orthologs identified in other species via the OPTIC pipeline.

(Human)  

Genome Location

Sequence SequenceType object (2)

Length: 1797 bp    Location:171926..149944   Strand:-
Raw sequence 
>bmy_19739
ATGAGTGCCGAGGAGGATGCCAAGTGGCTTCAGTGGGTGACACACCAGTTTGAGACCATTGCGGGAGAAGACAGGGAAATCAACCTGCAAGAGCTGAAAAGAGCCCTGAACGTGAAAGAGAGATTCTTCATTCTGTTTGACTCGGATGGAAGTGGCACCATCACGCTTCAGGAGCTGCAGGAGGCGTGGACCCTGCTCATCCACCGCAGCCCCACAGACAAACTCCAATTCCTCTTCCAGGTGCATGATGTTGACGGGAGCGGCTCCATCAACGTGGACGAGCTGCGCATCGTGCTGCAGTCGTGCCCGCGTGAGAGCGCCATCTCACTGCCCGAGGAGAAGCTGGACCAGCTGACGCTGGCGCTCTTCAAGTTGGCGGACAAGGACTGCAGCGGCGCCATCACCTTCGATGAGCTTCGAGACGAGCTGCAGCGCTTCCCCGGCGTCATGGAGAACCTGACCATCAGTGCTGCCCACTGGCTGACTCCTTCCGCCGCCGGGCCGCCCCGACACCGTCCTCGCCAGCTGACCTCTGCCTACTGGCACAACCACCACAGCCACCTGCCCTGCCTGGCCGCCTACGTGGACCTCCACGTGCTGCTGTTTGCCCTGGCAGCTAGTGTGCACCGGGCCCTCGGCGCCAGTGTCATGGTGGCCAAGGGCTGCGGCCAATGCATCAACTTTGACTGCAGCTTCATCGCGGTGCTGATGCTTAGGCGCTGCCTCACGTGGCTGTGGGCCACGTGGCTGGCTCAGGTCCTGCCGCTGCACCACAACCTCCAGTTCCACCAGCTTATGGGCTACGTGGTGGTCGGGCTCTCCCTCGTCCACACCGTGGCCCATGTGGTGAACTTCGGTGTTCTATTGGACCCACCTGTCCTACCTCCCATGTCTGCACGGSCCCAACTTCTGGAAGTGGCTGCTGGTCCCTGGCACCTTGTTCTTCCTGGAGAAGGCCGTCGGCCTGGCCGCATCCCRCATGGAGGCCCTGTGCATCGTGGAAGTCAATCTCCTCCCTTCCAAGACACCATCTGGCTACACATCCGGTCCCAGGGCCAGTGGACAAACAGGCTGTATGAGTCCTTCAAGAAATCAGACCCAGTGGGCTGTGGTTCCGAGAGGCTCTCGAGGAGTTTGAAGATGAGAAGGAGTCAGAGGAAGCTGCAGGTCAAAGGAAGAAAGCCCCCAGGCCTGGCCCAGCCCTGCCTTGCCCCTGTGGAATTTAAAGTCCARGGGACAAAACCATGTGGAATCCTGCCTGGTCAGACCAGAGGGACCTTCTTGAACAGTGCCAAGAGCAAAGCTCTGGGAAATGGAGAGGGTTTGCAGCCCCAGCCCATCCACTCTGGAGCCTCGGCACAGGGCGCAGTGGCCTCCAACAAGGATGTCTCTGTGGAGCTGATGTCCTACAGGCCCAAGGGAACTCCACRGCAGGAGGATGAAGGCCTGGTGTACGTGGGGACAAAGGACGGGGTTCAGGCACGGGARGTCCTGAAGCRTCARGGTCCGCTTCTCCCTCACCCACCCACCCTCTCYTTTAACCCCTCCTGCATGCAGTGCTACATCGATGGCCCTTACGGGACCCCCAACCGCAGGRTCTTCGCCTCCGAGCAYGCCGTGCTCATCGGGGCAGGCGTCRGCATCACCCCCTTTGCTTCTATCCTGCAGAGCATCTTGTACAGGCACCAGAAGAGAACGCACATCTGCCCCAACTGCCAGCACTGGGGGAGGGAGGGTGTGCAGGATGCTGACATGAAGCTCCACAAGGTGGACTTCATCTGGATCAACCGAGGCTAG

Related Sequences

bmy_19739T0 SequenceType object (3)

Length: 599 aa      View alignments
>bmy_19739T0
MSAEEDAKWLQWVTHQFETIAGEDREINLQELKRALNVKERFFILFDSDGSGTITLQELQEAWTLLIHRSPTDKLQFLFQVHDVDGSGSINVDELRIVLQSCPRESAISLPEEKLDQLTLALFKLADKDCSGAITFDELRDELQRFPGVMENLTISAAHWLTPSAAGPPRHRPRQLTSAYWHNHHSHLPCLAAYVDLHVLLFALAASVHRALGASVMVAKGCGQCINFDCSFIAVLMLRRCLTWLWATWLAQVLPLHHNLQFHQLMGYVVVGLSLVHTVAHVVNFGVLLDPPVLPPMSARXQLLEVAAGPWHLVLPGEGRRPGRIPHGGPVHRGSQSPPFQDTIWLHIRSQGQWTNRLYESFKKSDPVGCGSERLSRSLKMRRSQRKLQVKGRKPPGLAQPCLAPVEFKVQGTKPCGILPGQTRGTFLNSAKSKALGNGEGLQPQPIHSGASAQGAVASNKDVSVELMSYRPKGTPXQEDEGLVYVGTKDGVQAREVLKXQGPLLPHPPTLSFNPSCMQCYIDGPYGTPNRRXFASEHAVLIGAGVXITPFASILQSILYRHQKRTHICPNCQHWGREGVQDADMKLHKVDFIWINRG*