Part of scaffold_2180 (Scaffold)

For more information consult the page for scaffold_2180 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NCOA3 ENSTTRG00000000021 (Bottlenosed dolphin)

Gene Details

nuclear receptor coactivator 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000019, Bottlenosed dolphin)

Protein Percentage 95.2%
cDNA percentage 96.18%
Ka/Ks Ratio 0.3723 (Ka = 0.0282, Ks = 0.0757)

NCOA3 ENSBTAG00000007489 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009850, Cow)

Protein Percentage 91.5%
cDNA percentage 91.47%
Ka/Ks Ratio 0.20016 (Ka = 0.0471, Ks = 0.2352)

NCOA3  (Minke Whale)

Gene Details

nuclear receptor coactivator 3

External Links

Gene match (Identifier: BACU018318, Minke Whale)

Protein Percentage 95.28%
cDNA percentage 96.25%
Ka/Ks Ratio 0.44268 (Ka = 0.0272, Ks = 0.0615)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3903 bp    Location:184981..159952   Strand:-
>bmy_19762
ATGAGCGGATTAGGAGAAAACTCCTTGGATCCACTGGCCCCTGATTCACGAAAACGCAAGTTGCCATGTGATACTCCAGGACAAGGCCTTACCTGCAGCGGTGAAAAGTGGAGACGGGAGCAGGAGAGTAAATATATTGAAGAATTGGCTGAACTGATATCTGCTAATCTTAGTGATATTGACAATTTCAATGTCAAACCAGATAAATGTGCAATTTTAAAGGAAACAGTAAGACAGATACGTCAAATAAAAGAGCAAGGAAAAGCTATTTCCAGTGATGATGATGTTCAGAAAGCTGATGTATCTTCCACAGGACAAGGAGTTATTGATAAAGACTCCTTAGGACCACTTTTACTTCAGGCAATTAATGGAGTTACCTGGACTAATGAGACCCAGCGACAAAAAAGCCATACATTTAATTGCCGTATGTTGATGAAAATACCACATRACATTCTGGAAGACATAAACACTAATCCTGAAATGCGCCAGAAATATGAAACGATGCAGTGCTTTGCCCTGTCCCAGCCACGGGCTATGATGGAGGAAGGAGAAGATTTGCAATCCTGTATGATCTGTGTGGCACGCCGCATTACCACAGGAGAAAGAGCATTTCCATCAAATCCTGAGAGCTTTATTACTAGACATGATCTTTCAGGAAAAGTTGTCAACATAGATACAAATTCACTGAGATCTTCCATGAGGCCTGGTTTTGAAGATATAATCCGAAGGTGTATCCAGAGATTTTTTAGTCTTAATGATGGGCAGTCATGGTCCCAGAAACGTCACTATCAAGAAGGTAAAGAATTTGGAGTTGTAGTTACTAGTAATGGGATATTTTCTCCAAAAGCTTATATCCATGGCCATGCAGAAACCCCAGTGTATCGATTCTCTCTGGCTGATGGCACTATAGTGACTGCACAAACAAAAAGCAAACTCTTCCGAAATCCTGTAACAAATGATCGTCACGGCTTTGTCTCAACCCACTTTCTTCAGAGGGAACAGAATGGGTATAGACCAAACGCAAATCCTGTTGGACCAGGCATTAGACCTCCAGCAGCTGGATGCAACAGTTCGGTAGGCAGCATGAACATGTCGCCGAACCCAGGCTTGCAGATGCTGAGCAGCAGGACCTACGGCTTGGCTGAGCCCGGCACCGCGGGGCAGATGGGTGGAGCCAGGTATGGGCCTTCCGGTAGCATAGCTTCAGTGAACCCTGGGCCAGGCATGCAGTCACCATCTTCCTACCAGAACAGCAACTATGGTCTCAACATGAGTAGCCCTCCACATGGGAGTCCTGGTCTTGGCTCCAGCCAGCAGAATATTATGATTTCTCCTCGTAATCGTGGGAGTCCAAAGATGGCCTCACATCAGTTTTCTCCTGTTGCAGGTGTGCACTCTCCCATGGGATCTTCTGGCAATACTGGGAGTCACAGCTTTTCTAGCAGCTCTCTCAGTGCCCTTCAAGCTATCAGTGAGGGAGTAGGGACTTCTCTTTTATCTACTCTGTCTTCACCAGGTCCCAAATTGGATAACTCTCCCAATATGAATGTAAGTCAACCAAGTAAAGTGAACAGTCAAGATTCCAAGAGTCCCCTAGGCTTGTATTGCGACCAGAATCCAGTGGAGAGTTCAATGTGTCAGTCAAATAGCAGAGATCACCTCAATGACAAAGAAAGTAAGGAGAGCAGTGTGGAAGGGCCAGAGAATCAGCGGGGTCCTCTGGAAAGCAAAGGTCACAAAAAATTACTACAGTTACTTACCTGTTCTTCTGAGGACCGGGGTCATTCCTCCTTGACCAACTCGCCCCTGGATTCAAGTTGTAAAGACTCTTCCATTAGTGTCACCAGCCCCTCTGGGGTCTCCTCTTCGACGTCTGGAGGAGTGTCCTCCACGTCCAATATGCACGGGTCACTGCTGCAAGAGAAGCACCGGATTTTGCACAAGTTGCTGCAGAATGGGAATTCGCCGGCTGAGGTAGCCAAGATTACCGCCGAAGCCACTGGGAAAGACACTAGCAGTACAACGTCTTGTGTAGAAGGAAACGTCAAGCAGGAGCAACTAAGCCCTAAGAGAAAGGAAAACAATGCTCTGCTTAGGTATCTGCTGGACAGGGATGATCCTAGTGACACGCTCTCCAAAGAACTACAGCCCAAAGTGGAAGGCGGCGTAGACGGTAAAGTGAGCCAGTGCAGCAGCTCCACCATCCCGAGCTCAAGTCAAGGGAAGGACGCTAAAATTAAGACAGAAACAAGTGAAGAGGGATCTGGAGACTTGGATAATCTAGATGCTATTCTTGGTGATCTGACTAATTCTGACTTCTACAATAATTCCATATCCACAAATGGTAGTAATCTGGTAACGAAGCAACAAATGTTTCAAGGAACTAATTCTCTGGGTAAGAAAGAACTAGATTTTATTCTTGCTGCCTTTGAACTTTTCTGCACACCTGAAGACAGTGTTTATTTTGGTGGACCAAACAGAAATGTGACTGTGAATCAGACTCCTTCCTCGGGAGACTGGGGCTTACCGAACTCAAAGGCCAGCCGAATGGAACCTATGAATTCAAACTCCATGGGGAGACCAGGAACGGATTATAATGCTTCTTTACCCAGGCCTGCCATGGGTGGCTCAATGCCCGCCATGCCTCTTCGGTCCAGTAGCATCCCAGGTGTGAGACCAGTGTTGCAGCAGCATCATCAGCAGCAGCAGCAACAGCAGCAGATGCTTCAGATGCGGCCCGGTGAGATTCCCATGGGGATGGGGGTCAGTCCTTATGGCCAAGCAGCACCATCGAACCAACCTGGTTCCTGGCCAGATGGCATGTTGTCCATGGAACAAGGCCCTCATGGGACTCAAAATAGGGTCTTGAAAACACCACCCTCTTCATCCCTCCAATCTCCTTTCCTAAATCTCTGCTATCCTCTAAATGTCAAGGGATCTAGCAATTGCATTTTGGTGAGGAAAAGCACCATTGAAATTGAATCTAAGTCTCTTTTTAGGCCACTTCTTAGGAATTCCCTGGATGATCTCCTTGGGCCACCTTCTAACCTTGAAGGCCAGAGTGATGAAAGAGCATTGTTGGACCAGCTGCACACACTCTTGAGCAACACAGATGCCACAGGCCTGGAAGAAATTGACAGAGCTCTTGGCATTCCTGAACTTGTAAATCAAGGACAAGCTTTGGAGTCCAAACAGGATGCTTTCCAAGGCCAAGAAGCGGCAGTAATGATGGAGCAGAAGGCAGCATTGTATGGGCAGACGTACCCGACACAGGGGCCTCCAGTGCAAGGAGGCTTTAGTCTTCCGGGACAATCACCACCTTTTAACTCGATGATGAATCAGATGAACCAGCAAGGCGGTTTTCCTCTCCAAGGAATGCACCCTCGGGCCAACATCATGAGACCCCGGACAAACACTCCCAAGCAACTTAGAATGCAGCTTCAGCAGAGGCTGCAGGGCCAGCAGCAGGGTTTCCTTAACGCCCAGATGGTCGCCCAGCGCAGCAGAGAGCTGCTGAGTCACCACTTCCGACAGCAGAGGGTGGCGATGATGATGCAGCAGCAGCAACAGCAGCAGCAAACCCAGGCCTTCAGTCCACCCCCTAACGTGACTGCGTCCCCCACCATGGACGGAGTCCTGGCAGGGCCTGCCATGCCACAAGCTCCACCCCAGCAGTTTCCGTATCCACCAAATTATGGTAAATTTGTCAGGGATAATAATGTCTTCCCCAAAGTAACATTCCTACGGCTCTCTTTTTCCCAGCAGCAGTTTGCCCACCAGGGGAATCCTGCAGCATACAGTATGGTGCACATGAATGGCAGCAGTGGTCCCATGGGACAGATGAACATGAACTCCATGCCCATGACTGGCATGCCGATGGGTCCTGATCAGAAATATTGCTGA

Related Sequences

bmy_19762T0 Protein

Length: 1301 aa      View alignments
>bmy_19762T0
MSGLGENSLDPLAPDSRKRKLPCDTPGQGLTCSGEKWRREQESKYIEELAELISANLSDIDNFNVKPDKCAILKETVRQIRQIKEQGKAISSDDDVQKADVSSTGQGVIDKDSLGPLLLQAINGVTWTNETQRQKSHTFNCRMLMKIPHBILEDINTNPEMRQKYETMQCFALSQPRAMMEEGEDLQSCMICVARRITTGERAFPSNPESFITRHDLSGKVVNIDTNSLRSSMRPGFEDIIRRCIQRFFSLNDGQSWSQKRHYQEGKEFGVVVTSNGIFSPKAYIHGHAETPVYRFSLADGTIVTAQTKSKLFRNPVTNDRHGFVSTHFLQREQNGYRPNANPVGPGIRPPAAGCNSSVGSMNMSPNPGLQMLSSRTYGLAEPGTAGQMGGARYGPSGSIASVNPGPGMQSPSSYQNSNYGLNMSSPPHGSPGLGSSQQNIMISPRNRGSPKMASHQFSPVAGVHSPMGSSGNTGSHSFSSSSLSALQAISEGVGTSLLSTLSSPGPKLDNSPNMNVSQPSKVNSQDSKSPLGLYCDQNPVESSMCQSNSRDHLNDKESKESSVEGPENQRGPLESKGHKKLLQLLTCSSEDRGHSSLTNSPLDSSCKDSSISVTSPSGVSSSTSGGVSSTSNMHGSLLQEKHRILHKLLQNGNSPAEVAKITAEATGKDTSSTTSCVEGNVKQEQLSPKRKENNALLRYLLDRDDPSDTLSKELQPKVEGGVDGKVSQCSSSTIPSSSQGKDAKIKTETSEEGSGDLDNLDAILGDLTNSDFYNNSISTNGSNLVTKQQMFQGTNSLGKKELDFILAAFELFCTPEDSVYFGGPNRNVTVNQTPSSGDWGLPNSKASRMEPMNSNSMGRPGTDYNASLPRPAMGGSMPAMPLRSSSIPGVRPVLQQHHQQQQQQQQMLQMRPGEIPMGMGVSPYGQAAPSNQPGSWPDGMLSMEQGPHGTQNRVLKTPPSSSLQSPFLNLCYPLNVKGSSNCILVRKSTIEIESKSLFRPLLRNSLDDLLGPPSNLEGQSDERALLDQLHTLLSNTDATGLEEIDRALGIPELVNQGQALESKQDAFQGQEAAVMMEQKAALYGQTYPTQGPPVQGGFSLPGQSPPFNSMMNQMNQQGGFPLQGMHPRANIMRPRTNTPKQLRMQLQQRLQGQQQGFLNAQMVAQRSRELLSHHFRQQRVAMMMQQQQQQQQTQAFSPPPNVTASPTMDGVLAGPAMPQAPPQQFPYPPNYGKFVRDNNVFPKVTFLRLSFSQQQFAHQGNPAAYSMVHMNGSSGPMGQMNMNSMPMTGMPMGPDQKYC*