Sequence detailsbmy_19770 (Coding sequence)

Part of scaffold_2179 (SequenceType object (1))

For more information consult the page for scaffold_2179 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SENP1ENSTTRG00000015447 (Bottlenosed dolphin)

Gene Details

SUMO1/sentrin specific peptidase 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014647, Bottlenosed dolphin)

Protein Percentage 76.59%
cDNA percentage 77.38%
Ka/Ks Ratio 0.38988 (Ka = 0.0308, Ks = 0.079)

SENP1ENSBTAG00000012423 (Cow)

Gene Details

sentrin-specific protease 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000043264, Cow)

Protein Percentage 93.01%
cDNA percentage 94.56%
Ka/Ks Ratio 0.33462 (Ka = 0.038, Ks = 0.1135)

Additional orthologs identified in other species via the OPTIC pipeline.

SENP1 (Human)   Senp1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1572 bp    Location:133567..101374   Strand:-
Raw sequence 
>bmy_19770
CAGCTCTTCCGGTGTTGTGGAGGCGGTTCCGGTTCGCGGCGGTTCCCGGGTTTTGCGTTCCGCGCCCGGCCGGAAACCCCTTCGCATAGCAGCCGGTTCCGGTTCGGACTTTGTATCTTTGCTGAAGTCAGTGATGTGAAAACACCTGACATGGATGATACTGCTGATAGGATGAGGATGGATGCTGGAGAAGTAACTTTAGTGAACCACAACTCCATATTCAAAACCCATCTCCTGTCACAAACAGGTTTTCCAGAGGACCAGCTTTCACTTTCTGAYCATCAGATTTTACCTTCCAGGCAAGGAAATTTGGACCGATCTTATACTTGTTCTACAAGAAGTGCAGCTTATCCAAATTATTATTCAGACAACCCTTCCTCAGACAGTTTTCTTGGCTCAGGAGACCTAAGAACCTTTGGCCAGAGTGCAAATGGCCAGTGGAGAAATTCCACTCCAGCATCAGGTTCAACTTTACAAAAATCAAGAAACAGCCGAAGTCTTTACCTCGAAACCCGAAAGACCTCAAGTGGATTATCAAACACTTTTACAGGAAAGTCAAACCATCACTGTCATGTGTCTGCATATGAAAAATCTTTTCCTATTAAGCCTGTTTCAAGTCCATCTTGGAGTGGTTCATGTCGTCGAAATCTTTTGAGCCCCAAGAAAACTCAGAGGCGACACATTAGTACAGCAGAAGAGACAGTTCAAGAGGAAGAACGAGAGATTTACAGACAGCTGCTACAGATGGTCACAGGGAAACAGTTTTCTGTAGCCAAACCCACCACACACTTTCCTTTACACTTGTCTCGATGTCTTAGTTCCAGTAAGAATACTTTGAAAGACTCACTGTTTAAAAATGGAAACTCTTGTGCAACCCAGATCATTGGCTCTGATACTTCGTCATCTGGATCGGCCAGCATTTTAACTGCCCAGGAACAATTGTCCCACAATGTGTTTTCCATATCATCTTATACCCCAGATGTTGTTGCATTTGGATCCAAAGATTCTGATCCTCTCCATCAACCCCAACATCACCACTCTCTTTCACATCAGCCAGATAACTTACCAACTTCAAATACACAATCTGAAGGATCAGACTCTGTGATTTTACTCAAAGTGAAAGATTCCCAGACTCCAACTCCCAGTCCTACTTTTTTCCAGGCAGAGCTGTGGATCAAAGAATTGACTAGTGTTTATGATTCTCGAGCACGGGAAAGATTGCGCCAGATTGAAGAGCAGAAAGCACTGGCATTACAGCTTCAAAACCAGAGACTGCAGGAACAAGAACATTCAGTACATGATTCAGTAGAACTGCATCTTCGTGTGCCTCTTGAAAAGGAGATTCCTGTCACGATCGCCCAAGAAACAGGAAAAAAAGGTCATAAATTAACACAGAGCATAGACGAATTTCCTGAAATCACAGAGGAAATGGAGAAAGAAATAAAGAATGTATTTCGTAATGGGAACCAGGATGAAGTTCTGAGTGAAGCATTCCGCTTGACTATTACACGCAAAGATATTCAAACTCTAAATCATCTGAACTGGCTCAATGATGAGGTAATCTCACACTAG

Related Sequences

bmy_19770T0 SequenceType object (3)

Length: 524 aa      View alignments
>bmy_19770T0
QLFRCCGGGSGSRRFPGFAFRARPETPSHSSRFRFGLCIFAEVSDVKTPDMDDTADRMRMDAGEVTLVNHNSIFKTHLLSQTGFPEDQLSLSDHQILPSRQGNLDRSYTCSTRSAAYPNYYSDNPSSDSFLGSGDLRTFGQSANGQWRNSTPASGSTLQKSRNSRSLYLETRKTSSGLSNTFTGKSNHHCHVSAYEKSFPIKPVSSPSWSGSCRRNLLSPKKTQRRHISTAEETVQEEEREIYRQLLQMVTGKQFSVAKPTTHFPLHLSRCLSSSKNTLKDSLFKNGNSCATQIIGSDTSSSGSASILTAQEQLSHNVFSISSYTPDVVAFGSKDSDPLHQPQHHHSLSHQPDNLPTSNTQSEGSDSVILLKVKDSQTPTPSPTFFQAELWIKELTSVYDSRARERLRQIEEQKALALQLQNQRLQEQEHSVHDSVELHLRVPLEKEIPVTIAQETGKKGHKLTQSIDEFPEITEEMEKEIKNVFRNGNQDEVLSEAFRLTITRKDIQTLNHLNWLNDEVISH*