Part of scaffold_2184 (Scaffold)

For more information consult the page for scaffold_2184 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

UROD ENSTTRG00000003406 (Bottlenosed dolphin)

Gene Details

uroporphyrinogen decarboxylase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003194, Bottlenosed dolphin)

Protein Percentage 98.6%
cDNA percentage 98.51%
Ka/Ks Ratio 0.24042 (Ka = 0.0074, Ks = 0.0308)

UROD ENSBTAG00000012644 (Cow)

Gene Details

uroporphyrinogen decarboxylase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016778, Cow)

Protein Percentage 95.81%
cDNA percentage 95.81%
Ka/Ks Ratio 0.20191 (Ka = 0.0209, Ks = 0.1035)

UROD  (Minke Whale)

Gene Details

uroporphyrinogen decarboxylase

External Links

Gene match (Identifier: BACU000327, Minke Whale)

Protein Percentage 99.16%
cDNA percentage 98.88%
Ka/Ks Ratio 0.15361 (Ka = 0.0042, Ks = 0.0274)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1077 bp    Location:290628..294291   Strand:+
>bmy_19786
ATGGAGGCGAACAAGTGTGGACCTCAGGGTTTTCCGGAGCTGAAGAATGACACCTTCCTGCGAGCAGCCTGGGGAGAAGAAACAGACTACACTCCTGTTTGGTGCATGCGGCAGGCAGGCCGCTACTTACCAGAGTTTAGGGAAACTCGGGCTGCCCAGGACTTTTTCAGCACCTGTCGCTCCCCAGAGACCTGCTGTGAACTTACTCTGCAGCCACTGCATCGCTTCCCTCTGGATGCTGCCATCATCTTCTCCGACATCCTTGTTGTACCCCAGGCACTGGGCATGGAGGTGACCATGGTGCCTGGCAAAGGGCCCAGCTTCCCAGAGCCATTAAGAGAAGAGCGGGATTTACAGCGCCTCCGGGATCCAACAACAGTGGCCTCTGAGCTGGGTTATGTGTTCCAGGCCATCACCCTCACTCGACAACGTCTGGCTGGGCGTGTGCCACTGATTGGCTTTGCTGGTGCCCCGTGGACTCTCATGACATATATGGTTGAGGGTGGCGGCTCAAGCACCATGGCTCAGGCCAAACGCTGGCTTTACCAGAGACCGCAGGCCAGTCACCAGCTGCTTCGCATCCTCACTGATGCTCTCGTCCCATATCTGGCGTTGCAGCTCTTTGAGTCCCATGCAGGGCATCTTGGCCCACAACTCTTCAGTAAGTTTGCACTGCCCTACATCCGTGATGTGGCCAAGCGAGTGAAAGCCGGGCTGCAGGAGGCAGGCCTGGCACCAGTGCCCATGATCATCTTTGCTAAGGACGGACATTTTGCCCTGGAGGAGCTGGCCCAGGCTGGCTACGAGGTGGTTGGGCTTGACTGGACAGTGGCCCCAGAGAAAGCCCGGGATTGCGTGGGAAAGACAGTGACCCTGCAGGGCAACCTGGACCCCTGTGCCTTATATGCATCTGAGGAGGAGATTGGGCGGTTGGTGCAGCAGATGCTGAATGACTTTGGGCCGCAGCGCTACATTGCCAACCTGGGCCATGGACTTTACCCTGACATGGACCCAGAACACGTGGGAGCCTTTGTGGATGCCGTGCACAAACACTCACGCCTGCTTCGACAGAATTAA

Related Sequences

bmy_19786T0 Protein

Length: 359 aa      View alignments
>bmy_19786T0
MEANKCGPQGFPELKNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAAQDFFSTCRSPETCCELTLQPLHRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLQRLRDPTTVASELGYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLALQLFESHAGHLGPQLFSKFALPYIRDVAKRVKAGLQEAGLAPVPMIIFAKDGHFALEELAQAGYEVVGLDWTVAPEKARDCVGKTVTLQGNLDPCALYASEEEIGRLVQQMLNDFGPQRYIANLGHGLYPDMDPEHVGAFVDAVHKHSRLLRQN*