Sequence detailsbmy_19787 (Coding sequence)

Part of scaffold_2184 (SequenceType object (1))

For more information consult the page for scaffold_2184 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ZSWIM5 (Minke Whale)

Gene Details

zinc finger, SWIM-type containing 5

External Links

Gene match (Identifier: BACU000326, Minke Whale)

Protein Percentage 11.72%
cDNA percentage 30.68%
Ka/Ks Ratio 0.17035 (Ka = 1.8345, Ks = 10.7694)

Additional orthologs identified in other species via the OPTIC pipeline.

ZSWIM5 (Cow)   ZSWIM5 (Human)   Zswim5 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 717 bp    Location:320476..299338   Strand:-
Raw sequence 
>bmy_19787
ATGAATGAAAGCAGAGCCCCTGTGTACCAGCATGTGCCTGTGGCYGCAGGCTGCCCAGACAGCAGTGAGTCCTACCTGTCATTGGCCATGGAAGTTGCTCTGATGGGGATGGGTCAACAGAGGGTGATGCCTGAAGGCCTCTACGCACAGGACAAGGTGTGCCGTAATGAGGAGCAGCTCCTTAGTCGACTCCAGGAGCTGCAGCTGGATGATGAGCTAGTGCAAACACTGCAGAAGCAGTGCATCTTACTCCTGGAAGGAGGCCCCTTCAGCRGTCTGGGAGAAGTYATCCACCGAGAGAGTGTTCCCATGCATACCTTTGCCAAGTATTTGTTCTCAGCTCTACTGCCTCATGATCCAGACCTGTCCTATAAATTAGCCTTACGTGCCATGAGGTTACCTGTTCTAGAAAACTCAACTTCTGCAGGCGACACTTCCCACCCTCACCATATGGTATCTGTGGTGCCCAGCCGTTACCCTCGCTGGTTCACGCTTGGACACTTGGAATCACAGCAGTGTGAACTGGCCTCCACCATGCTGACTGCTGCCAAAGGAGACACTCTGAGGCTCCGCACAATCCTGGAAGCAATACAGAAGCACATCCATTCTTCCTCCCTCATCTTCAAACTGGCCCAAGATGCATTCAAGATTGCTACACCCACGGACAGTAGTACAGACAGCACCCTGCTCAACGTGGCCCTGGAGCTGGGGTTACAG

Related Sequences

bmy_19787T0 SequenceType object (3)

Length: 239 aa      
>bmy_19787T0
MNESRAPVYQHVPVAAGCPDSSESYLSLAMEVALMGMGQQRVMPEGLYAQDKVCRNEEQLLSRLQELQLDDELVQTLQKQCILLLEGGPFSXLGEVIHRESVPMHTFAKYLFSALLPHDPDLSYKLALRAMRLPVLENSTSAGDTSHPHHMVSVVPSRYPRWFTLGHLESQQCELASTMLTAAKGDTLRLRTILEAIQKHIHSSSLIFKLAQDAFKIATPTDSSTDSTLLNVALELGLQ