Sequence detailsbmy_19792 (Coding sequence)

Part of scaffold_2194 (SequenceType object (1))

For more information consult the page for scaffold_2194 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RNF6ENSTTRG00000015900 (Bottlenosed dolphin)

Gene Details

ring finger protein (C3H2C3 type) 6

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000015066, Bottlenosed dolphin)

Protein Percentage 94.15%
cDNA percentage 96.15%
Ka/Ks Ratio 0.47609 (Ka = 0.0299, Ks = 0.0627)

RNF6ENSBTAG00000005318 (Cow)

Gene Details

E3 ubiquitin-protein ligase RNF6

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000044516, Cow)

Protein Percentage 80.21%
cDNA percentage 79.71%
Ka/Ks Ratio 0.1746 (Ka = 0.1212, Ks = 0.6944)

RNF6 (Minke Whale)

Gene Details

ring finger protein (C3H2C3 type) 6

External Links

Gene match (Identifier: BACU000139, Minke Whale)

Protein Percentage 98.8%
cDNA percentage 98.7%
Ka/Ks Ratio 0.19965 (Ka = 0.0057, Ks = 0.0286)

Additional orthologs identified in other species via the OPTIC pipeline.

RNF6 (Human)   Rnf6 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2007 bp    Location:315912..326772   Strand:+
Raw sequence 
>bmy_19792
ATGAATTGGTCTAGATCTAGATCAGATGGTGGTGGTGAAGAAACCTCATCTCAAGACCAGAATCATCATGAAAACGAGAGAAGGTGGCAGCAAGAGCGTCTCCACAGAGAAGAAGCCTATTATCAGTTTATTAATGACCTCAGTGACGAAGATTACCGGCTAATGAGAGACCATAATCTTTTAGGCACCCCTGGAGAAATAACATCAGAAGAATTACAACAACGGTTAGATGGAGTCAAGGAACAGCTAGCATCTCAGCCTGACTTGAGAAATGGGACAAACACCAGAGACTCAGGGGTCCCTCGAGAAAGTTCAAATGAAGATTCTCTGCTGGAATGGCTCAACACCTTTCGTCGCACGGGAAACGCAACTCGAAGTGGRCAGAATGGGAACCAGACTTGGAGAGCTGTGAGTCGAACAAACCCACACAGTGGAGAGTTCCGATTTAGTCTGGAAATCCACATAAATCATGAGAATAGAGGATTTGAAATGGATGGCGAAGATTATGTGGGCGTTCCACTTTCAGATGTTAGCCAAGATCGCACTACAGATGGGCCACAGCGATCAAGTAGTCCCGTGGCCAGGCGAACAAGGAGCCAAGCTGCAGGGAATCTCAGTGGTAGTAGTGCCAGCGTTCCGAGAACTAGGCTTGGATCGAGGGGGCGGAATTCAGTAGAAGGATCTTTGTCAGCATTGGGAAGATTAAGAAATGGAATTGGGGGGGCAGTTGGCGTCCCTAGAACTAGTGCTCCACGCGCAAATTTCAGCAGTCCGTCAGCTGGTAGTGAACTCAGGCAAAGGGAGGGGCAGCGATTTGGAGCAGCCCATGTTTGGGAAAACGGGGCTAGAACTAACGTCACAGTGAGGAATACAAACCAAAGATTAGAGCCAATAAGATTACGGTCTACTTTCAATAGCCGAAGCCGGTCACCAATTCAGAGGCAAAGTGGCACTGTTTATCATGGTTCACAAAGGGAAAGTAGACCTTTTCAGCAAACTAGTAGGCGGTCTGTTAGGAGGAGAGGTATAACTCGTGTCTTTCTAGAGCAAGACCGAGAAGGCAGAGGTACCGCATATACTCCACTCTCTAACTCAAGACTTGTGTCAAGAATCACAGTAGAAGAAGGAGAAGAGGCCAGCAGGTCCTCCACTGCTGCACGACGACATCCAACAATCACACTGGACCTTCAAGTGAGAMGGATCCGTCCTGGAGAAAGCAGAGACCGGGACAGTATTGCAAATAGAACTCGATCTAGGATGGGGCTGGCAGAAAACACAGTCACTATCGAAAGCAGTAGTGGGGGCTTTCGGCGCACCATCTCTCGTTTAGAGCGCTCAGGTATGCGAACCTACGTTAGTACCGTAACTGTTCCTCTTCGTAGGATTTCTGAGAATGAGCTCGTTGAACCATCATCAGTGGCTCTTCGATCAATTTTAAGGCAGATCATGACTGGATTTGGAGAACTGAGTTCTTTTATGGAGGCCGAATCTGAGTCAGAGGCTCAGAGAAGTGGTCAGCATCGGCCAGAGACACACTCAGAAGTGAGTCTCCTCGGTGAGACCGTCAGCCAGCACAGGGGAGGGTCCTCGCAAGGCAGGCGGACCCGAGAAGACAGCCCTGACGCCCCGCCTCGTGCCCCAAACAGAGGTGGCAGGCAGTCGCGAAATTCAAGTAACTTGGTCGAAACTGGCACCCTACCTATCCTTCGCCTCGCTCACTTCTTCTTGCTTAATGAAGGGGAGGATGATGACCGCATGCGTGGTTTAACCAAAGAGCAGATTGACAATCTTTCCACCCGGAACTATGAGCACAGCAGTATCGATAGCGAACTAGGGAAAATCTGTAGTGTTTGCATCAGTGACTACGTAACGGGAAACAAGCTCAGGCAGTTACCTTGCATGCATGAATTTCACATCCACTGTATCGACCGGTGGCTCTCAGAGAATTGCACGTGTCCTATCTGTCGGCAGCCTGTCTTAGGGTCCAGTACAGCAAACAACGGGTGA

Related Sequences

bmy_19792T0 SequenceType object (3)

Length: 669 aa      View alignments
>bmy_19792T0
MNWSRSRSDGGGEETSSQDQNHHENERRWQQERLHREEAYYQFINDLSDEDYRLMRDHNLLGTPGEITSEELQQRLDGVKEQLASQPDLRNGTNTRDSGVPRESSNEDSLLEWLNTFRRTGNATRSGQNGNQTWRAVSRTNPHSGEFRFSLEIHINHENRGFEMDGEDYVGVPLSDVSQDRTTDGPQRSSSPVARRTRSQAAGNLSGSSASVPRTRLGSRGRNSVEGSLSALGRLRNGIGGAVGVPRTSAPRANFSSPSAGSELRQREGQRFGAAHVWENGARTNVTVRNTNQRLEPIRLRSTFNSRSRSPIQRQSGTVYHGSQRESRPFQQTSRRSVRRRGITRVFLEQDREGRGTAYTPLSNSRLVSRITVEEGEEASRSSTAARRHPTITLDLQVRRIRPGESRDRDSIANRTRSRMGLAENTVTIESSSGGFRRTISRLERSGMRTYVSTVTVPLRRISENELVEPSSVALRSILRQIMTGFGELSSFMEAESESEAQRSGQHRPETHSEVSLLGETVSQHRGGSSQGRRTREDSPDAPPRAPNRGGRQSRNSSNLVETGTLPILRLAHFFLLNEGEDDDRMRGLTKEQIDNLSTRNYEHSSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSSTANNG*