Part of scaffold_2182 (Scaffold)

For more information consult the page for scaffold_2182 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SHROOM3 ENSTTRG00000014880 (Bottlenosed dolphin)

Gene Details

shroom family member 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014109, Bottlenosed dolphin)

Protein Percentage 86.72%
cDNA percentage 89.19%
Ka/Ks Ratio 0.46278 (Ka = 0.0422, Ks = 0.0912)

SHROOM3 ENSBTAG00000019633 (Cow)

Gene Details

protein Shroom3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026154, Cow)

Protein Percentage 78.23%
cDNA percentage 82.29%
Ka/Ks Ratio 0.32396 (Ka = 0.0949, Ks = 0.293)

SHROOM3  (Minke Whale)

Gene Details

shroom family member 3

External Links

Gene match (Identifier: BACU000805, Minke Whale)

Protein Percentage 85.84%
cDNA percentage 87.77%
Ka/Ks Ratio 0.46773 (Ka = 0.043, Ks = 0.0918)

Genome Location

Sequence Coding sequence

Length: 4959 bp    Location:269955..295322   Strand:+
>bmy_19793
GATCAGCTGAGATTGCTCCTAACGCTGGGGGTCCCTCTCCTGTGTCTCCCCAGGCGCAGTGAACCTTCGGGCCGACCTCATTCTTGGCATTCAACCAAATTTGGGGAGAACCAACCCGATGCCAGCATGATGCAGATATCTCAGGGCACGATTGGCACTCCTTGGCCCCAGAGCTACCATTCCAGCTCCTCTACCAGTGACCTCTCCGGCTATGACCATGCTTATCTGAGGCGGAGTCCTGACCAGTGCAGCTCCCAGGGGAGCATGGACAGCCTGGAGCCCAGCGGGGGATGCCCGCCCTGCCACCTTCTCTCCCCGGCCAAGTCTACCAGCAGCATTGACCAGCTCAGCCACCTCCATAACAAGAGAGACTCGGCTTACAGCTCCTTCTCCACCAGTTCCAGCATCCTCGAATATCCGCCCCCCGGCATCTCTGGCCGGGAGCGTTCAGGCTCCGTGGACACCACTTCTGCTCGAGGTGGCCTCCTAGAAGGGATGAGGCAGGCAGACATTCGCTATGTTAAGACAGTCTATGATCCCCGGAGGGGGGTCTCAGCAGAGTATGAGGTGAACTCTTCAGGCCTGCTTCTGCAAGGTAAGGAGGCCCGAGCATTGGCAGATGGTCAGGGCTATGAGAAATGGCATAGTGTTCCTCGGGGCAAGGAAGCGCCACCCCCCTCCTGGAGCCAGCACTGCCCCAGCTCCTTGGAGACCACCGCGGACAACTTGCCTCCTAAAGTGGSTGCGCCCCTGCCCCCGGCTCGGAGTGACAGTTATGCGGCCTTTCGGCAGCGAGAGCGGCCTGGCTCCTGGTCTAGCCTTGATCAGAAACGGTTCTGCCGGCCTCAGGCAAACTCTGCAGGCACCCTGAAATCTCCCTTCATAGAGGAACAGCTGCATACTGTGCTGGAGAAGAGTCCAGAAAACAGCCCCCCAGTGAAGCCCAAGCATAATTACACCCAGAAGGCCCAACCTGGCCAACCTCTGCTGCCGACTGGCATCTACCCGGTACCTTCCCTGGAGCCACACTTTGCCCAGGTGCCCCGGCCTTCCGTGAGTGGTAACGGCACCCTCTACCCTGCGCTGGCCAAGGAGGGCGGGTATCCAGCTCCGCAGGGAGCTTGCGACRAGACGGCCGCCCTTGATGAGAATGGGAACCAAAATGGATCTAGCAGGCCTGGCTTTGCCTTCTGCCAGCCCCTAGAACATGACTCAGTGTACCCAGGAGAGAGGAAACCTGAAGTTTCAGCCAAATGTGTCCCCTACAAAGTCCATTTCCCCTCAGTGCCTGAAAACGAGGAGGAGACCTCCCTGAAGAGACTTCTCACACCTCTCCAAGGCAACAGCCCACATCCCAGTGAGAGAAAGAGCACCCAGGGCAACAAATATTCTAATTACCACGGAYTCCAATCCCCTCAGGCTCAGGCCTGGCAAGTGGGTGAAGACAARAGATCTTTCCTGCCCTCAGAGCCTTGGGAGGGTGATTTCCATGAAGACCACAATGCCAACCTCCGGCGGAGGCTCGAGAGAGGCAGCCTGGGCCAGAGCATGCCAAGCAACTTTGGCAAGACCACATCTGCCTTCTCCTCCCTCCAGAACATTCCTGAGAGTCTAAGAAGGCAAAGCAGCCTGGATCTAGGAGGCRGAGCCCAGGAGATCTACCTGGAAGGCACATCCACCTGTGCAGTCAGCACCAAGGCAGAGGACTCTGGAAGGACTATTGTTCCTGATCACAGGAGCCAGCTGGACAGGTCAGTTTCCTATCCCAGGCCTGAGGGGAGAACCAGTGCCTCGGCTTCGTTCCACAGTTCAGACCCGAGGTATGAAGAGCTGCCCTCCCCRCCCCCGCAGGAGACATCCAGTCTGGGCCGAAGGAGGCTCAGCTCCAGCAGTGCCTCGGCTCTGCAGGGCTTTCAGTATGGGAAGCCCCACTGCTCGGTGCTGGAGAAGGTTTCCAAGATCGAGCAGCGAGAGCAAGGGAGCCAGAGGCCCCCGAGTGCGGGCAGCTCTAGTTACGGTTATAACCACAGGCCCAACAGGGCACTCCCAACTTCTCATACTTCGGGGAATGACTTGGAGGAGACAAAGGCCCATATCCGTTTTTCCGAATCCACTGAACCCCTAGGCAATGGGGAACTGCACTGCAAAAACGGGGAGCCGAAGTCGGAAGAGGTTTCCTGGCAGCCGTGTGGTCAGCACCCCAGGCGGGACGCTCGCCTGCTCCGCAGCCAGAGCACCTTCCAGCTCTTCAGCGAGGCCGAGAAGGAGGCCGTGTGGCCCGATGACCGGCCCCGCACGCCAGAGTCGCCCGTGCAGGATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCGAGCAGAAGAAGCGCTCGTACTCGGAGCCCGAGAAGATGCACGAGGTGGGGGTCTCGGAGGAGGCCGAGCCGGCGCCCCCGGGCCCGCCAAGGAAGGGGCCGCAGTTCGCGGAGAGCTCGGTGGCTGACCGGCGCCGCATCTTCGAGCGAGACGGCAGGGCCTGCTCGACCCTCAGCCTGTCGGGGCCCGAGCTGAAGCAGTTCCAGCAGAGCGCGCTGGCCGACTACATTCAGCGCAAGACCGGCAAGCGGCCCGCTGCCGCCGGCTGCGGCCTCCAGGAGCCTGGCCCGCTGCGGGAGCGCGCGCAGAGCGCCTACCTCCAGGCCGCGCCCGAGGGCCCCGGCCTCGCTGCGGCCTGCAGTCTCTCCTCTCTGCGGGAGCCCAGCCTGCCGCCCCGCAGGGAGGCCGCCCTCCAGCCGGCCACCGCGGAAGGGGGTGGCGGGGAGCCGCCACGGGCCCCCCGAGATCGCAGCAGCTCCTTTGCCGGCGGCCGCCACCTCGGGGAACGGCGCCGCGGAGACCAAGCCCCGAGAGAACTGCTCGGTGGAGCTAACGGCGGTCCAAAGGGCCCCCAGAGGCTGGACAGGACCCCTGGGGAGCCTTCCCCGTGGGGGTCCGCGGCCGGGAGGGCCGGGAAGTCCATGTCGGCCGAGGACCTGCTGGAGCGCTCAGACGTCCAGGCCGTCCCTGTCCACATGAGGTCACGGTCATCTCCCACCGCAGACAAGCGCCAGGATGTGCTTTTGGGGGAAAACAGTGGCTTTGGTCTTGTGAAGGATCCATGTTATTTGGCTGGCCCAGGATCCAGGCCATTCAGCTGTTCCAGCCGTGAAGAGATGTCGTTGCTCCAACACCATCCCAGCCCTCGTTGCGGGGTTTCGGGCTGCAAAGCAGGTGGCGGTGCCTCCATTCCCGGCAGGGGTCCGGGACCGCTGGACCCTCCAAGGCAGGCCAGCAGAACGCCTTGCCCCCGGTCCCTGCCCTCAGGAGCGCAAGGGCATCTCCCGGACACCAGGGCTGCACCGCCGAGCTCAGCCCTGCCTGCCCCTGGCCCCTCGAGCTACTGCTCACAGGCCGCCGCCGCCCAGCCCTGCACCCMAGCCGGGACCCCCAGAAGTGGCGGCCACCGGCCGGCCCAGCCTCCCAGCCCCGAGCGCAGGAAGGAGGAGGGAGCAGGGACGCGGCCCTCCCCGCCCTGGGTGAAGCGGACCCACGCGGTCAGAGAGGACAGCCTCCCGGAGGACGCCGCATCGCCTGGGTGCTCGAGCCCGAAGCCGCAGGCCCTCCCCAGCCCCAGCAGCACTTCCGACCCAGACACGCCCCTCGGGGCCCCAGACACGCCCCTCGGGGCCCCGGGCACTCTGGGCAGGATCTCCCTCCGGATCTCTGAGTCTGCCCTGCTGGCCTCCCTGCCGCCTCGGGAAGACAACGACGACGAGGAGGTGTTCGTGAGGGACCTGCGCTCCACCGCCACTTCCGGCCCCACCTGCGAAGCGCCGCCGCCGCCCAGCCGGGAAGCCCCGGCCCAGAACCTGGACCGCTTCCCTCCGCCTCCCCCTGAAGCTGTGTGCGCGGAGCAGTGGGACAGCGAGGGCTACCGGGAGCCCCACGCCAGCAGCTCCAGCAAACTTGCCAAGGTGACAATTGCCAAGGAAAGGCCCATCCCTGGTGCAGCCCATTTGGTTGATAGTCAGATACTGGCTTCCAGATCCCATACTTCTATCAAGAGTTCAGAGGCCAACGAGACCGACCCACCCTCCACCACCAGTGCTCTGCCCCAGCCTGCCGGGTCTCTTAGCAAGCAGCCAAGCCCAGGGCAGCCACCTTCCATCCAGACCCAAAGCCTCAGCCACGACCCAGTCAGTGGGACTCAAAGTTTAGAAAAGAATGTCAGTTCTGGTCCTCAGAAGACCTCASAAGACATGAGAACAGAGGCTCTGGCCAAGGAAATTGTCCACCAAGACAAATCTCTGGCAGACATTTTGGATCCAGACTCCAGAATGAAGACAACTATGGACCTGATGGAAGGTTTGTTTCCACGAGATGCTAATCTGCTGAAGGAAAACAGCATGAAGAGGAAGGCCACGCAGAGAACTGTCAGCTTCCCAGGATGTGAAGCTAAGAGGAGTGAAGACAAGGAAGCAGTGGGCATGTTGGTCAACTGTCCTGTCTACTACAGCGTGTCTGCTCCCAAGGCCGAGCTTCTGAACAAAATCAAAGCTATGCCAGAGGAAGTGAATGAGGAAGAGGAGCCGGCAGACATCAACGAAAAGAAGGTAAGGAAAGAAATGGGGGCCTTTGTTATGCTCCCCCCAGAAAGATAG

Related Sequences

bmy_19793T0 Protein

Length: 1653 aa      View alignments
>bmy_19793T0
DQLRLLLTLGVPLLCLPRRSEPSGRPHSWHSTKFGENQPDASMMQISQGTIGTPWPQSYHSSSSTSDLSGYDHAYLRRSPDQCSSQGSMDSLEPSGGCPPCHLLSPAKSTSSIDQLSHLHNKRDSAYSSFSTSSSILEYPPPGISGRERSGSVDTTSARGGLLEGMRQADIRYVKTVYDPRRGVSAEYEVNSSGLLLQGKEARALADGQGYEKWHSVPRGKEAPPPSWSQHCPSSLETTADNLPPKVXAPLPPARSDSYAAFRQRERPGSWSSLDQKRFCRPQANSAGTLKSPFIEEQLHTVLEKSPENSPPVKPKHNYTQKAQPGQPLLPTGIYPVPSLEPHFAQVPRPSVSGNGTLYPALAKEGGYPAPQGACDXTAALDENGNQNGSSRPGFAFCQPLEHDSVYPGERKPEVSAKCVPYKVHFPSVPENEEETSLKRLLTPLQGNSPHPSERKSTQGNKYSNYHGXQSPQAQAWQVGEDKRSFLPSEPWEGDFHEDHNANLRRRLERGSLGQSMPSNFGKTTSAFSSLQNIPESLRRQSSLDLGGXAQEIYLEGTSTCAVSTKAEDSGRTIVPDHRSQLDRSVSYPRPEGRTSASASFHSSDPRYEELPSPPPQETSSLGRRRLSSSSASALQGFQYGKPHCSVLEKVSKIEQREQGSQRPPSAGSSSYGYNHRPNRALPTSHTSGNDLEETKAHIRFSESTEPLGNGELHCKNGEPKSEEVSWQPCGQHPRRDARLLRSQSTFQLFSEAEKEAVWPDDRPRTPESPVQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEQKKRSYSEPEKMHEVGVSEEAEPAPPGPPRKGPQFAESSVADRRRIFERDGRACSTLSLSGPELKQFQQSALADYIQRKTGKRPAAAGCGLQEPGPLRERAQSAYLQAAPEGPGLAAACSLSSLREPSLPPRREAALQPATAEGGGGEPPRAPRDRSSSFAGGRHLGERRRGDQAPRELLGGANGGPKGPQRLDRTPGEPSPWGSAAGRAGKSMSAEDLLERSDVQAVPVHMRSRSSPTADKRQDVLLGENSGFGLVKDPCYLAGPGSRPFSCSSREEMSLLQHHPSPRCGVSGCKAGGGASIPGRGPGPLDPPRQASRTPCPRSLPSGAQGHLPDTRAAPPSSALPAPGPSSYCSQAAAAQPCTXAGTPRSGGHRPAQPPSPERRKEEGAGTRPSPPWVKRTHAVREDSLPEDAASPGCSSPKPQALPSPSSTSDPDTPLGAPDTPLGAPGTLGRISLRISESALLASLPPREDNDDEEVFVRDLRSTATSGPTCEAPPPPSREAPAQNLDRFPPPPPEAVCAEQWDSEGYREPHASSSSKLAKVTIAKERPIPGAAHLVDSQILASRSHTSIKSSEANETDPPSTTSALPQPAGSLSKQPSPGQPPSIQTQSLSHDPVSGTQSLEKNVSSGPQKTSZDMRTEALAKEIVHQDKSLADILDPDSRMKTTMDLMEGLFPRDANLLKENSMKRKATQRTVSFPGCEAKRSEDKEAVGMLVNCPVYYSVSAPKAELLNKIKAMPEEVNEEEEPADINEKKVRKEMGAFVMLPPER*