Sequence details bmy_19802 (Coding sequence)

Part of scaffold_2197 (Scaffold)

For more information consult the page for scaffold_2197 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VPREB3 ENSTTRG00000002044 (Bottlenosed dolphin)

Gene Details

pre-B lymphocyte 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001920, Bottlenosed dolphin)

Protein Percentage 85.71%
cDNA percentage 93.02%
Ka/Ks Ratio 0.90822 (Ka = 0.0741, Ks = 0.0815)

VPREB3 ENSBTAG00000005128 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000050772, Cow)

Protein Percentage 80.23%
cDNA percentage 86.43%
Ka/Ks Ratio 0.19828 (Ka = 0.0971, Ks = 0.4899)

VPREB3  (Minke Whale)

Gene Details

pre-B lymphocyte 3

External Links

Gene match (Identifier: BACU017143, Minke Whale)

Protein Percentage 98.08%
cDNA percentage 98.72%
Ka/Ks Ratio 0.31872 (Ka = 0.0088, Ks = 0.0275)

Additional orthologs identified in other species via the OPTIC pipeline.

VPREB3 (Human)   Vpreb3 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 501 bp    Location:89830..88497   Strand:-
Raw sequence 
>bmy_19802
ATGCTGACGTCTGGGAAGATAAGGTCTGGCTGCTGGGGCCCAGCACCGCCCTCCCACCGTGTCAGTGGGCTGATTTGCATGCCCTGTCGTGGTCCAGCAGCCTCCCCAGTGTGCCCTGAAGCACCTGGAGCACGCCCAGCGCAAGCCCAACACAACAAGCGACTCCCACCTACCTCCCTGCCTCTGGCCATGGCCTGTTGGCATCTGGCCCTCCTTCTGACTGGGGTCCTCCTGGCAGCCTCCCAGCCAACCCTGACCCAGCCGGACACACTGCTGGTCTTCCCAGGCCAAGTGGCCCAACTCTCCTGCATGCTCAGCCCCCGCCATGCCATCGTCGGGGACTACGGCGTGTCTTGGTATCAGCAGCAGGCAGGCAGCGCCCCCCGCTTGCTCCTCCACTACCGCTCAGAGGAGGACCACCACCGCCCCCCTGACATCCCTGACCGCTTCTCGGCAGCCACGGATGCAGCCCATAATGCCTGCATCCTGACCATCAGCCCC

Related Sequences

bmy_19802T0 Protein

Length: 167 aa      View alignments
>bmy_19802T0
MLTSGKIRSGCWGPAPPSHRVSGLICMPCRGPAASPVCPEAPGARPAQAQHNKRLPPTSLPLAMACWHLALLLTGVLLAASQPTLTQPDTLLVFPGQVAQLSCMLSPRHAIVGDYGVSWYQQQAGSAPRLLLHYRSEEDHHRPPDIPDRFSAATDAAHNACILTISP